Lysobacter capsici: LC55x_2586
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Entry
LC55x_2586 CDS
T04162
Symbol
iam
Name
(GenBank) isoamylase
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
lcp
Lysobacter capsici
Pathway
lcp00500
Starch and sucrose metabolism
lcp01100
Metabolic pathways
lcp01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
LC55x_2586 (iam)
Enzymes [BR:
lcp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
LC55x_2586 (iam)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Isoamylase_C
Alpha-amylase
CBM_48
pulA_all-beta
ISOA1-3_C
Motif
Other DBs
NCBI-ProteinID:
ALN85851
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Position
complement(2838243..2840648)
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AA seq
801 aa
AA seq
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MVRCGYAVESTARHAGRVAELSAMHTAKQAWIQAGITATGWLLASLLGLHAGAARAAIDS
QQLGARYDATQANLNFRVYSSRATRIEVWLYKTPSGAQEVAKLVLTKDAASQVWSKSVAV
TTIKNSYGITGTVYYGYRAWGPNWPYNAAWTKGSGTGFVSDVDSAGNRFNPNKLLLDPYA
REISQDPNTAACTDGTIYASGATHRNKDSGACASKGVALLADTTSFGSKPTRALKDEVIY
EVHVRGLTRNDASVPAAERGTYLGAARKATALAALGVTAVEFLPVQETQNDQNDVDPNST
TDDNYWGYMTLNYFAPDRRYAFDKSAGGPTREWKAMVKAFHDAGIKVYIDVVYNHTGEGG
AWGGTDGLTVYNLLSFRGLDNPAYYSLSSDFQYPWDNTGVGGNYNTRHPIAQNLIVDSLA
YWRDTLGVDGFRFDLASVLGNSCQHGCFNFDKTDSGNALNRISAELPPRAAGGGAGIDLI
AEPWAIGGNSYQVGNFPAGWAEWNGLYRDALRKKQNKLGVEVVTPGTLASRFSGSSDLYG
DDGRKPWHSINFMVAHDGFTLNDLYAYDSKQNNQPWPYGPSDGGEDHNLSWNQGGVVAEQ
RKAARTGLAFVLLSAGVPMMTGGDEALRTQFGNNNTYNLDSAANWLYWTRSSIEADHETY
TKRMIAFRKAHPALRPIGFYSGADNNGNVMEQLRWFKPDGAQADNAYFNGSDNHALAWRI
DGSEFGDSASAIYIAYNGWSGPVNFVLPWAGIGKQWYRVTDTATWNEGPNTVALPGSETL
IGGENTTYAMQGRSVLVLVAK
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgctgcggctacgccgtagagtcgaccgcgcgccatgccgggcgcgtagcggaa
ctcagcgcgatgcacactgccaagcaagcatggattcaagcagggatcacggccaccgga
tggctactcgcatcgctgcttgggctgcacgcgggggcggcgcgggccgcgatcgacagc
cagcaactgggcgcgcgctacgacgcgactcaagccaatctcaacttccgcgtgtattcc
tcgcgcgccacccggatcgaagtgtggctgtacaagacgccgtcgggcgcgcaggaagtc
gccaagctggtgctgaccaaggacgcggccagtcaggtgtggtcgaagtcggtcgcggtg
acgacgatcaagaacagctacggcatcaccggcacggtctactacggctatcgcgcctgg
ggcccgaactggccatacaacgcggcctggaccaagggcagcggcaccggcttcgtcagc
gatgtcgacagcgccggcaaccgcttcaatccgaacaagctgctgctcgatccgtatgcg
cgcgagatcagccaggacccgaataccgccgcctgcaccgacggcacgatctacgccagc
ggcgcgacccatcgcaacaaggacagcggcgcctgcgcgagcaagggcgtggcgctgctc
gccgacaccacgtcgttcggcagcaagcccacccgcgcgcttaaggacgaagtgatctac
gaagtgcacgtgcgcggcctcacccgcaacgacgccagcgtgcccgccgccgaacgcggc
acctacctcggcgccgcgcgcaaggccaccgcgctggccgcgctcggggtgaccgcggtg
gaattcctgccggtgcaggaaacccagaacgaccagaacgacgtcgatccgaattcgacc
acggacgacaactactggggctacatgaccctgaactatttcgcgcccgatcgccgttac
gctttcgacaagagcgccggcggcccgacccgcgaatggaaggcgatggtcaaggcgttc
cacgacgccggcatcaaggtctatatcgacgtggtctacaaccacaccggcgaaggcggc
gcctggggcggaaccgacggcctgaccgtgtacaacctgctgtcgttccgcggcctcgac
aatccggcctactactcgctcagcagcgactttcaatacccgtgggacaacaccggcgtc
ggcggcaactacaacacccgtcatccgatcgcgcagaatctgatcgtcgactcgctggct
tattggcgcgatacgctcggcgtggacggcttccgtttcgacctggcctcggtgctgggc
aacagttgccagcacggctgcttcaacttcgacaagaccgacagcggcaatgcgctcaat
cgcatcagcgccgaactgccgccgcgcgcggccggcggcggcgccggcatcgacctgatc
gccgagccgtgggcgatcggcggcaattcgtatcaggtcggaaatttcccggccggctgg
gcggagtggaatggtctgtaccgcgacgcgctgcgcaagaagcagaacaagctcggggtc
gaagtggttacgcccggcacgctggcctcgcgcttttccggctccagcgatctgtacggc
gacgacggccgcaagccctggcattcgatcaacttcatggtcgcccacgacggcttcacc
ttgaacgatctgtatgcctacgacagcaagcagaacaatcagccctggccgtacggcccg
tccgacggcggcgaagaccacaacctcagctggaaccagggcggcgtggtcgccgaacaa
cgcaaggccgcgcgcaccggtctggccttcgtgctgctcagcgccggcgtgccgatgatg
accggcggcgacgaagcgctgcgcacccagttcggcaacaacaacacctacaatctggat
tcggcggcgaactggctgtactggacgcgcagcagcatcgaagccgaccacgagacctac
accaagcgcatgatcgcgttccgcaaggcgcatccggcgctgcgtccgatcgggttctat
tccggcgcggacaacaacggcaacgtcatggagcagttgcgctggttcaagcccgacggc
gcccaggccgacaacgcgtacttcaacggcagcgacaaccatgcgctggcgtggcgcatc
gacggcagcgagttcggcgacagcgccagcgcgatctatatcgcctacaacggctggtcg
ggtccggtgaatttcgtcctgccgtgggccggtatcggcaagcagtggtatcgggtgacg
gatacggcgacctggaacgaagggccgaatacggtggccttgccgggcagcgagacgctg
atcggcggggagaatacgacgtatgcgatgcaggggaggtcggtgttggtgttggttgct
aagtga
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