Lysobacter capsici: LC55x_2753
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Entry
LC55x_2753 CDS
T04162
Name
(GenBank) FAD binding domain of DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcp03400
]
LC55x_2753
Enzymes [BR:
lcp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LC55x_2753
DNA repair and recombination proteins [BR:
lcp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LC55x_2753
Prokaryotic type
LC55x_2753
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ALN86018
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All DBs
Position
complement(3142514..3143944)
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AA seq
476 aa
AA seq
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MPDTNAIALVWFRNDLRLSDNPALRAALDAGYIPVPIYIHAPDEHGSWRPGAASDAWRHR
SLEALDRDLRKRGSHLRRFFGPSLATLQSLVLATDAKAVFWNRRYEPYIEKRDTKIKQAL
RRMDLEVESFNSALMFEPWTLRTKQGGPFKVFTPFWRSALANWKDEPLWEPPASLPSTRE
GPEGVPLTALRLSPRRDWADGFWDYWTPGEAGAHAALEVFVDGALRGYGEQRDRPDRVGT
SRLSPHLHFGEIAPWRAAAVLRQHRTAANAGDVDSAVRELGWREFAHHLLHHFPDTPEQN
FNPRFIDFDWAKVSEPKLEAWQQGRTGVPIVDAGLRELWATGWMHNRVRMIVASYLTKHL
RYHWRHGARWFWDTLVDADLASNTLGWQWVAGTGADAAPYFRVFNPVTQAEKFDPAGEYI
ARWVPELAPLPAPLRHAPWREPRTLQRVAPDYPPQPLVDLAAGRDAALAAYRKMRD
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacaccaacgccatcgccttggtctggttccgcaacgacctgcgcctgtccgac
aacccggccctgcgcgccgcgctggacgcgggctatatcccggtcccgatctacatccat
gcgcccgacgagcacggcagctggcgccccggcgccgcctccgacgcctggcggcatcgc
tcgctcgaagcgctcgatcgcgacctgcgcaaacgcggctcgcacctgcgccgtttcttc
ggccccagcctggccacgctgcaatcgctggtgctggcgaccgatgccaaggcggtgttc
tggaatcgccgctacgagccctacatcgaaaaacgcgacaccaagatcaagcaggcgctg
cggcgcatggacctggaggtcgaaagcttcaacagcgcgttgatgttcgaaccgtggacc
ttgcgcaccaaacaaggcggcccgttcaaggtgttcaccccgttctggcgcagcgcattg
gcgaactggaaggacgaaccgctgtgggagccgccagcctcgctgccgagcacccgcgaa
gggcccgagggcgtgccgctgacggcgctgcgcctgtcgccgcggcgcgattgggccgac
ggtttctgggactactggacgcccggcgaagccggcgcgcatgccgcgctcgaggtcttc
gtcgacggcgccttgcgcggctatggcgaacaacgcgaccggcccgaccgggtcggcacc
tcgcgcttgtcgccgcacctgcatttcggcgagatcgcgccgtggcgcgcggccgcggtg
ctgcgccagcaccgcaccgcggccaatgccggcgacgtcgactcggcggtgcgcgaactg
ggctggcgcgaattcgcccatcacctgctgcatcactttccggacacgccggaacaaaac
ttcaacccgcgcttcatcgatttcgattgggcgaaggtgtccgagccgaagctcgaggcc
tggcagcagggccgcaccggtgtgccgatcgtcgacgccggcctgcgcgaactgtgggcc
accggctggatgcacaaccgcgtgcgcatgatcgtcgccagctatctgaccaagcacctg
cgctatcactggcgccatggcgcgcgctggttctgggacaccctggtcgacgccgacctc
gccagcaacaccttgggctggcagtgggtggccggcaccggcgccgacgccgcgccgtac
ttccgtgtgttcaacccggtgacccaggccgagaaattcgaccccgccggcgagtacatc
gcacgctgggtgccggaactggcgccattgcccgcgccgctgcggcacgccccatggcgc
gaaccgcgcaccttgcagcgcgtggcccccgactatccgccgcaaccgctggtcgatctg
gcggcggggcgcgatgcggcgctggcggcgtatcggaagatgcgcgattga
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