Lysobacter capsici: LC55x_2828
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Entry
LC55x_2828 CDS
T04162
Name
(GenBank) bacterial regulatory, tetR family protein
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcp03000
]
LC55x_2828
Transcription factors [BR:
lcp03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
LC55x_2828
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_13
TetR_C_13_2
DUF6262
Motif
Other DBs
NCBI-ProteinID:
ALN86093
LinkDB
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Position
complement(3217379..3217936)
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AA seq
185 aa
AA seq
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MKVSREQVGENRRRILDEAGRLFRARGFEAVTVAEVMKAAGLTHGAFYGHFQSKDDLIAQ
TLGHVLSQAQVGDELRPFVDFYLSPHHCGDLAGGCPTAALGADTIRQSPQARQAMTEGLR
QHLQHMTRMESAPDEATRRRQAIGAWSAMVGAVILARLSDDPALSEEVLAQTRAWIDEST
SASAD
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcagtcgcgaacaggtaggcgagaaccggcgcaggatcctcgacgaggccggc
cggctgttccgtgcgcgcgggttcgaggcggtcacggtggccgaggtgatgaaggccgcc
ggcctgacccacggcgcgttctacggccactttcagtccaaggacgacctgatcgcgcag
accctgggccatgtgctgagtcaggcccaggtcggcgacgaactgcggccgttcgtggat
ttctacctgtcgccgcatcactgcggcgacctcgccggcggttgcccgaccgccgcgctc
ggcgccgacacgatccgccagtcgccacaggcgcggcaggcgatgaccgagggcttgcgc
cagcatctgcagcacatgacccggatggaatccgcgccggatgaagccacccgcaggcgc
caggcgatcggcgcctggtcggcgatggtcggcgcggtgatcctggcgcggctcagcgac
gacccggcgctgtcggaggaagtgctggcgcagacccgggcgtggatcgacgaaagcacc
tcggcgagcgcggactag
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