Lysobacter capsici: LC55x_3047
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Entry
LC55x_3047 CDS
T04162
Name
(GenBank) putative ATPase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcp03400
]
LC55x_3047
DNA repair and recombination proteins [BR:
lcp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
LC55x_3047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
ResIII
AAA_22
AAA_30
FtsK_SpoIIIE
SLFN-g3_helicase
CbiA
AAA_25
AAA_10
TrwB_AAD_bind
T2SSE
AAA_19
AAA_7
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ALN86310
LinkDB
All DBs
Position
3477145..3478680
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AA seq
511 aa
AA seq
DB search
MAPTPDARPNDILLGKAVTTPDSGLVYLHTKLGNRHGLVAGATGTGKTVTLMTLAEGFSR
QGVPVFLADVKGDVAGLAMPGAANDKLQSRLTEIGIADWAPGASPVVFWDLFGKLGHPVR
TTVSEMGPTLLARILELNDTQSGVLDIVFKLADDRGLLLLDLEDLRALLGLVADERKDIS
TSYGLVSTQSVGAIQRSLLRLEQEGGDHFFGEPALQLADLMRTSTDGRGVVNVLAADSLI
LKPRLYSSFLLWLLSELFEQLPEVGDIDKPKLVFVFDEAHLLFDDAPPALQQRVEQVVRI
IRSKGVGVYFCSQFPDDIPDNILGQLGNRVQHALRAFTPRDQKAVKTAAETFVPNPALNV
AEAISQLGTGEALVSTLQDKGVPMPVERTLIAPPRCRMGAITEAERAQVRATSPIGPKYD
TAINRESAAEMLLQRAQAATEQAQAPPAKTREQDDQEEGGFGQAVKDAVFGTKRRQGMVE
AMAKQTARTVGNQVGRQILRGLLGGIFGGKR
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggccccgacccccgacgcacgcccgaacgacatcctgctcggcaaggccgtcaccacg
cccgacagcggcctggtctatctgcacaccaagctcggcaaccgtcacggcttggtcgcc
ggcgccaccggcaccggcaagaccgtcaccctgatgaccctggccgaaggtttttcgcgc
cagggcgtgccggtgttcctggccgacgtcaaaggcgacgtggccggcctggcgatgccc
ggcgcggccaacgacaagctgcaatcgcggctgaccgagatcggtatcgccgactgggcg
ccgggcgccagtccggtggtgttctgggacctgttcggcaagctcggccatccggtgcgc
accacggtcagcgaaatgggcccgaccctgctggcgcgcattctcgaactcaacgacacc
cagtccggcgtgctcgacatcgtgttcaagctcgccgacgaccgcggcctgctgctgctc
gatctggaagacctgcgcgccctgctcggcctggtcgccgacgagcgcaaggacatctcg
accagctacggcctggtcagcacccagtcggtcggcgcgatccagcgttcgctgctgcgc
ctggaacaggaaggcggcgatcatttcttcggcgaaccggcgctgcagctggccgacctg
atgcgcaccagcaccgacggccgcggcgtggtcaacgtgctcgccgccgattcgctgatc
ctcaagccgcgcctgtactccagctttttgctgtggctgctgtcggaactgttcgaacag
ctgcccgaagtgggcgatatcgacaagcccaagctggtgttcgtgttcgacgaggcgcat
ctgttgttcgacgatgcgccgcccgcgctgcagcagcgggtcgaacaggtggtgcgcatc
atccgttccaagggcgtgggcgtgtacttctgctcgcagttccccgacgacatccccgac
aacatcctcggccagctcggcaaccgcgtgcagcacgcgctgcgcgcgttcaccccgcgc
gatcagaaggcggtcaagaccgcggcggaaaccttcgtgccgaacccggccttgaacgtg
gccgaggcgatctcgcagctcggcaccggcgaggcgctggtctcgaccctacaggacaag
ggcgtgccgatgccggtcgaacgcaccctgatcgcgccgccgcgctgccgcatgggcgcg
atcaccgaggccgaacgcgcccaggtgcgcgcgaccagcccgatcgggccgaagtacgac
accgcgatcaaccgcgagtccgccgccgagatgctgctgcagcgtgcccaggccgcgacc
gaacaggcgcaggcgccgccggccaagacccgcgaacaggacgatcaggaagaaggcggc
ttcggtcaggcggtcaaggacgcggtattcggcaccaagcgccgccagggcatggtcgag
gccatggccaagcagaccgcgcgcaccgtcggcaaccaggtcggccggcagatcctgcgc
ggcctgctcggcggcatcttcggcggcaagcgctaa
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