Lysobacter capsici: LC55x_3079
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Entry
LC55x_3079 CDS
T04162
Name
(GenBank) outer membrane autotransporter barrel domain protein
KO
K20276
large repetitive protein
Organism
lcp
Lysobacter capsici
Pathway
lcp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LC55x_3079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
Autotransporter
Big_9
Cadherin_5
SprB
Cadherin_4
NtrZ
Motif
Other DBs
NCBI-ProteinID:
ALN86342
UniProt:
A0A0S2FS33
LinkDB
All DBs
Position
complement(3511186..3517875)
Genome browser
AA seq
2229 aa
AA seq
DB search
MTNMQQQSARHAGGSFVSRLHTVLRSGLFVLCGLAALWAGSAAAAPSAFCPVLTMSVANG
GNQTIDVSTCDGPADFGLAVATYPTPHGSASVQTVAQSVQTLTYTHNGDSALSDTFLVPD
GNGGDITVNVTIAPGVSPLTVSPATINPALGVAYSQTMSTTGGVGPYTYVRTSGALPNGL
NFSNGTFSGTVRQRGNFPIAITVTDSTTPTAISVVKSYQITIPNNQPVIGPDPLPAMTRN
YPYSAQLTSTGGNAPYTYSINSGALPPGLSLSGTGAITGTPTTTGNYSFTVRSVDDSDLG
PGVPAIAFGIKTYNVSVALEPTIVVNPATIPGATVGVAYSQTFTGGGGTAPYTFAISAGA
LPAGLSLNTTSGALTGTPTAAGTFNFTVRATDANSFAGTRAYTLVVAPPVTLIAPTTLPN
GTVAAAYSQAITASGGIAPYTYAITAGALPAGLTLSSAGALSGTPTAGGTFNFTVTATGS
STGTGAPHTGARAYALVIAPPTVLLPATSFAPATVAVAYSANLNPASGGTAPYTYALSAG
ALPPGMSLSSTGTLSGTPTAPGTFNFAVTATDSSTGSGAYSSAPRGYTLQVVNIPPVANP
VSATVAYNSTANPITLNITGGVPTSVAIGTAAAHGTATATGATITYTPTAGYAGPDSFTY
TATNTAGTSAPATVTITVTAPTITVSASGPLTAQIGVAYTQTFTWTGGTSPFSGFAVTGL
PAGLSITGTTATSVTVSGTPSAAGSFALNTSATDSSTGDGPFTIGQAFTLTVSAPTLTLT
PAAGTLNATYGAAYSQTFVAGGGTAPYNYSISAGALPAGLSLDANTGVLSGTPSVTGLFT
FSVRARDSSTGSGAPFARTQNYVMQVAAPTIVIAPPTLPGAQVATAYSQTLSASGGIGAY
TFAVTAGALPPGVSLSSAGTIAGTPSAGGTFNFTVTASDANVQSGSRAYSLTVSAATIVV
SPTTLPGGGVAQAYSQTVTASGGTAGYTFAITAGALPAGLSLASNGTLSGTPSAGGTFNF
TITATDSSTGSGPYTGSRAYSVTIAASTVILPPTTLAAATVTNPYNATVNAATGGTAPYT
YAVSAGSLPPGLSVSSAGVISGTPTAPGSYSFSLRATDSSTGTGPYTSAPQTYALQVNDI
VPVANPVSATVAFNSTANPITLNITGGIPASVAVAAAPAHGTATASGTTITYTPTAGYAG
PDTFTYTATNVAGTSAPATVTITVGNPTITVTASGPLTAQVGSPYSQTFTWAGGTSPYSG
FGVTGLPAGLSVTGTTADSVTVSGTPTAAGSFALNASAADSSTGNGPFTTAQAFTLTVSA
PTLAMTPAPGNLPMNYGVASTINFAASGGSAPYSFSLAAGSLPVGVSFSSAGVLSGTPTV
PGNYNIAVRVLDSSTGAGAPFALQQNYTIVVATPAIAIDPPTLPNGTAAVAYNASLSSTG
GVAPYSYSLLSGALPIGMSFSSAGVFSGIPRSDGNFSVTVQSTDNNGQTGSKVYTFTIDP
AIVTIAPATLPGGTVGLAYNQSLSSSGGIAPYSYSIVSGNLPIGLSFSSAGVLSGTPTTA
GSYTANIRSTDDAGYNTTAPYTIVIADAVPVAVDDSASTLSNAPVTIDVTANDTGIITSI
ALATAPAHGTATVSGTDVIYTPAANYFGSDSFTYTASGPGGTSAPATVTITVNALPVPQG
QPQTATTLSTQPVTIDAATGATGSPFTGVTLLNPPSSGTAVVQGTQIVYTPAATTVGAIA
LTYTLNNAFGPSAPITSTITVNAVPVAQSRRVRTVAGATITVDLVAGATGGPFTGANLVS
LTPASSGTAAVSGSGGSYQLTYTPVIGYSGIAVASFTLNNAFATSAVATIEVEVMPRSDP
SKDAEVLGLLSAQTSATRRFATTQIGNFQQRLEGLHGGGEEGARFDNGLSFSIDPRCRDD
APRTPGNDCRQPMLGDERAAIESKPPVQGTGSRYGLWTGGTLNSGNRDGRSGGASGIDFE
TTGISAGADYRLRDDFALGGGIGYGRDDTEVGQHGSRSKAHGYSAVLYASYHPGKSFYLD
GLLGYQWLSFDSRRFVTDTGGMVTGSRDGNQWFASISAGADYQRDRLRISPYARLDVARA
RLDGYTERGDAQYVLNYRDQDIDTTTTSLGLRMDYIYPVRWGTFAPQLRLEYQHDFQDDS
FATMSYADMVGGPFYRARIDGLDRNRFVFGLGAILQTERDWVLRFEYRGLFGSGNDDDNS
FMINLEKKY
NT seq
6690 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacatgcaacagcagtcagcgcgccatgcgggcggttctttcgtctcgcgcctg
cacaccgtacttcgctccggcctgttcgtgctatgcggactggcggccctatgggccggg
tcggccgcggcggcgccctcggcgttctgccctgtgctcaccatgtcggtcgccaatggc
ggcaaccagacgatcgatgtgagtacctgcgacggaccggctgacttcggcctggccgtg
gcgacgtacccgaccccgcacggctccgcctccgtccagacggtcgctcagagcgtgcag
acgctcacctatacccacaacggcgacagcgcgctcagcgacacgttcctcgtgcccgac
ggcaacggcggcgacatcacggtcaacgtgacgatcgcgccgggcgtcagcccgctcacg
gtcagtccggcgacgatcaatcccgccctgggcgtcgcctacagccagaccatgtccacc
accggtggcgtcgggccctatacctatgtccggaccagcggcgctctgccgaacggtctg
aacttcagcaacggcactttcagcggcacggtgcggcagcgtggcaatttcccgatcgcg
atcaccgtgaccgattcgaccacgccgaccgcgatcagcgtggtgaagtcgtaccagatc
accatcccgaacaatcagccggtcatcgggccggatccgttgccggcgatgacccgcaac
tacccgtattcggcccagctcaccagcaccggcggcaatgcgccgtacacctactcgatc
aatagcggggcgctgccgccgggcttgagcctgagcggcaccggcgcgatcaccggcacg
ccgaccaccacgggcaactacagcttcaccgtcaggtcggtcgacgacagcgatctcggc
ccgggcgttccagcgatcgccttcggtatcaagacctacaacgtcagcgtcgcgctcgaa
cccaccatcgtggttaacccggccaccatccccggcgccaccgtcggcgtcgcctacagc
cagaccttcaccggcggcggcggcaccgcgccgtacaccttcgccatcagcgccggcgcg
ctgccggccggcctgagcctcaacaccaccagcggcgccctgaccggcaccccgaccgcg
gccggcaccttcaacttcaccgtccgcgccaccgacgccaacagcttcgccggtacccgc
gcctacaccctggtggtggcgccgccggtcacgctgatcgctccgaccaccttgcccaac
ggcacggtcgcggccgcttacagccaggcgatcaccgccagcggcggcatcgcgccgtac
acctatgcgatcaccgcgggcgccttgccggccggtctgaccctgagcagcgccggcgcc
ctgagcgggacgccgaccgccggcggcaccttcaacttcaccgtcaccgcgaccggcagc
agcaccggtaccggcgcaccgcacaccggtgcgcgcgcctatgcgctggtgatcgcgccg
ccgaccgtgctgctgccggcgaccagcttcgctcccgccaccgtcgcggtcgcgtacagc
gccaatctcaaccccgccagcggcggcaccgcgccgtacacctacgccctcagcgcgggc
gccttgccgcccggcatgagcctgagcagcacgggcacgctgtcgggcacgccgaccgcc
ccgggcaccttcaacttcgccgtgaccgcgaccgacagcagcaccggcagcggcgcgtac
agttcggccccgcgcggctacaccttgcaggtcgtcaacattccgccggtcgccaatccg
gtctcggccacggtcgcttacaacagcaccgccaatccgatcaccttgaacatcaccggc
ggcgttccgacctcggtggcgatcggcacggcggccgcgcatggcaccgcgacggccacc
ggcgccacgatcacctacaccccgaccgccggttacgccggccccgacagcttcacctac
accgcgaccaacaccgccggcacctcggcgccggccacggtcacgatcacggtgactgcg
ccgacgatcacggtgtccgcgtccggcccgctgaccgcgcagatcggcgtcgcctacacc
cagaccttcacctggaccggcggcacctcgccgttcagcggcttcgcggtcaccggcttg
ccggccggtctgtcgatcaccggcactaccgcgaccagcgtgaccgtcagcggcacgccg
agcgcggccggcagcttcgccctcaacaccagcgccaccgacagcagcaccggcgacggt
ccgttcaccatcgggcaggcgttcaccctgacggtcagcgcgccgaccctgaccctgacg
cccgcggccggcacgctcaacgccacctacggcgccgcgtacagccagaccttcgtcgcc
ggcggcggcaccgcgccttacaactacagcatctcggcgggcgcattgccggccggcctg
agcctggacgcgaacaccggcgtgctgtcgggcacgccgtccgtgaccggcctgttcact
ttctcggtgcgggcgcgcgacagctccaccggcagcggcgctccgttcgcgcgcacccag
aactacgtcatgcaggtggcggcgccgaccatcgtgatcgcaccgcccaccttgccgggt
gcgcaggtcgcgaccgcctacagccagaccttgagcgccagcggcggtatcggtgcgtac
accttcgcggtcaccgctggtgccttgccgcccggcgtgagcctgagcagcgccggcacc
attgccggcacgccgagcgcgggcggcaccttcaacttcaccgtgaccgcgagcgacgcc
aatgtgcaaagcggttcgcgcgcttactccctgaccgtcagcgctgcgacgatcgtggtc
agcccgacgaccctgccgggcggcggcgtggcccaggcctacagccagaccgtgaccgcg
tcgggcggcaccgcgggctataccttcgcgatcaccgccggcgccttgccggccggcctc
agcctggccagcaacggcaccctcagcggtacgccgagcgcgggcggcaccttcaacttc
accatcaccgcgaccgacagcagcaccggcagcggcccgtacaccggttcgcgcgcctac
agcgtgaccatcgcggcctcgacggtgatcctgccgccgaccaccctggccgcggcgacg
gtgaccaacccgtacaacgccaccgtcaacgccgccaccggcggcaccgcgccgtacacc
tacgcggtcagcgccggcagcttgccgccgggcctcagcgtcagcagcgccggcgtgatc
tccggcacgccgaccgcgccgggcagctacagcttcagcctgcgcgcgaccgacagcagc
accggcaccggcccgtacacctcggcgccgcagacctatgcgctgcaggtcaacgacatc
gtcccggtcgccaatccggtctcggccacggtcgccttcaacagcaccgccaatccgatc
accttgaacatcaccggcggcattccggcctcggtggcggtcgccgccgcgcccgcgcac
ggcaccgcgacggccagcggcaccacgatcacctacacgccgaccgccggttacgccggt
cccgataccttcacctacaccgcgaccaacgtggccggcacctcggctccggcgacggtc
acgatcacggtcggcaacccgaccatcaccgtgaccgcctcaggtccgctgaccgcgcag
gtcggcagcccgtattcgcagaccttcacctgggccggcggcacctcgccgtacagcggc
ttcggcgtcaccggtctgccggcgggtcttagcgtcaccggcaccaccgccgacagcgtc
accgtcagcggcacgccgaccgcggccggcagtttcgccctcaacgccagcgcggccgac
agcagcaccggcaacggtccgttcaccaccgcgcaggccttcaccctgacggtgagcgcg
ccgaccctggcgatgactccggcgccgggcaacctgccgatgaactacggcgtcgccagc
accattaacttcgccgccagcggcggctcggcgccgtacagcttcagcctggctgccggt
tcgttgccggtgggcgtgagcttcagttcggccggcgtactcagcggcacgccgacggtt
ccgggcaactacaacatcgcggtgcgcgtgctcgattccagcaccggcgccggcgcgccg
ttcgccctgcagcagaactacaccatcgtggtcgccaccccggccatcgcgatcgatccg
ccgaccctgcccaacggcaccgccgcggtcgcctacaacgccagcctcagcagcaccggc
ggtgtcgcgccgtacagctactcgctgctcagcggcgcgttgccgatcggcatgagcttc
agctcggccggtgtgttctccggcatcccgcgttcggacggcaacttcagcgtgaccgtg
cagtccaccgacaacaacggccagaccgggtcgaaggtctacaccttcaccatcgacccg
gcgatcgtcacgatcgcgcctgcgacgttgccgggcggcaccgtcggtttggcctacaac
cagagcctgagcagcagcggcggcatcgccccgtacagctactcgatcgtctcgggcaac
ctgccgatcgggttgagcttcagctcggccggcgtgctcagcggcaccccgaccaccgcc
ggcagctacaccgccaacatccgctcgaccgacgacgccggctacaacaccaccgcgccg
tacacgatcgtcatcgccgacgcggtgccggtcgcggtcgacgacagcgcgagcaccttg
tcgaacgcgccggtgacgatcgatgtcaccgccaacgacaccggcatcatcacctcgatc
gcgctcgccaccgcgccggcccacggcaccgccacggtcagcggcaccgacgtgatctac
acgccggccgcgaactacttcggcagcgacagcttcacctacaccgccagcggccccggc
ggcacctcggcgccggccacggtcacgatcacggtcaacgccttgccggttccgcagggc
cagccgcagaccgcgaccacgctgtcgacccagccggtcaccatcgacgccgccaccggc
gccaccggctcgccgttcaccggcgtgaccttgctcaatccgccgagctcgggcaccgcg
gtggtgcagggcacccagatcgtctacacgcccgcggccaccaccgtcggcgcgatcgcg
ctgacctacaccttgaacaacgccttcggcccgtccgcgccgatcacctcgaccatcacc
gtcaacgcggtgccggtcgcgcagtcgcggcgggtgcgcacggtcgccggcgcgaccatc
accgtcgacctggtcgccggcgccaccggcggtccgttcaccggcgcgaacctggtctcg
ctgactccggcgtcgtcgggcacggcggcggtcagcggctcgggcggcagctatcaactg
acctacaccccggtgatcggctactccggcatcgcggtcgccagcttcaccctcaacaac
gccttcgccacctcggcggtggcgacgatcgaagtcgaagtcatgccgcgcagcgatccg
tccaaggacgccgaagtgctcggcctgctgtcggcgcagacctcggccacgcgtcgcttc
gccaccacccagatcggcaacttccagcagcgcctggaaggcctgcatggcggcggcgaa
gagggcgcgcgcttcgacaacggcctgagcttctcgatcgacccgcgttgccgcgacgac
gcgccgcgcaccccgggcaacgattgccgtcagccgatgctcggcgacgaacgcgccgcg
atcgagtccaagccgccggtgcagggcacgggctcgcgttacggcctgtggaccggtggt
accttgaacagcggtaaccgcgatggccgcagcggcggcgcgagcggcatcgacttcgag
accaccggcatcagcgccggcgccgactaccgcctgcgcgacgacttcgcgttgggcggc
ggcatcggctacggccgcgacgacaccgaagtcggccagcacggcagccgcagcaaggcc
cacggctacagcgcggtgctgtacgccagctaccacccgggcaagagcttctatctggat
ggtctgctgggttaccaatggctgtcgttcgactcgcgccgcttcgtcaccgacaccggc
ggcatggtcaccggctcgcgcgacggcaatcagtggttcgcctcgatctcggccggcgcc
gactaccagcgcgaccgcctgcggatttccccgtatgcccgcctggacgtcgcccgcgcg
cgcctggacggctacaccgaacgcggcgacgcgcagtacgtgctgaactatcgcgaccag
gacatcgacaccaccaccaccagcctgggcctgcgcatggactacatctacccggtccgc
tggggcacgttcgcgccgcagctgcgcctggaataccagcacgacttccaggacgacagc
ttcgccacgatgagctacgccgacatggtcggcggcccgttctaccgcgcccgcatcgac
ggcctggaccgcaaccgcttcgtgttcggcctcggcgcgatcctgcagaccgagcgcgac
tgggtcctgcgcttcgaataccgcggcctgttcggcagcggcaacgacgacgacaacagc
ttcatgatcaatcttgagaagaagtactga
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