Lysobacter capsici: LC55x_3089
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Entry
LC55x_3089 CDS
T04162
Symbol
soxR
Name
(GenBank) redox-sensitive transcriptional activator SoxR
KO
K13639
MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcp03000
]
LC55x_3089 (soxR)
Transcription factors [BR:
lcp03000
]
Prokaryotic type
Helix-turn-helix
MerR family
LC55x_3089 (soxR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MerR-DNA-bind
MerR_1
MerR
HTH_IclR
HTH_17
COMP
DUF6447
DNA_meth_N
Unstab_antitox
PriCT_2
Motif
Other DBs
NCBI-ProteinID:
ALN86352
LinkDB
All DBs
Position
complement(3523817..3524296)
Genome browser
AA seq
159 aa
AA seq
DB search
MNMELTVGQVAERSGVAVSALHFYEAKGLIHSLRTAGNQRRYSRDTLRRIAVIRVAQRVG
MPLATIREALDTLPGSRAPTRADWVRLSAAWKDELEQRIANLSLMRDTLDQCIGCGCLSI
DRCRLANPDDTWGEQGSGAQRWAAALQQAKPRRGGKRAG
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgaacatggaactcaccgtcggccaggtggccgaacgctccggcgtggcggtatcggcc
ctgcatttctacgaggccaagggcctgatccacagcctgcgcaccgccggcaatcagcgc
cgctacagccgcgacaccttgcgccggatcgcggtcatccgcgtcgcccagcgcgtgggc
atgccgctggcgacgatccgcgaagcgctcgacaccttgcccggatcgcgcgcgcccacg
cgcgcggactgggtgcgcctgtcggcggcgtggaaggacgaactcgaacaacgcatcgcc
aacctgagcctgatgcgcgacaccctggatcagtgcatcggttgcggttgtctgtcgatc
gaccgttgccgcctggccaatccggatgacacctggggcgagcagggctcgggcgcgcag
cgttgggcggcggcgttgcagcaggccaagccgcggcgtgggggtaagcgcgcgggatag
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