Lysobacter capsici: LC55x_3210
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Entry
LC55x_3210 CDS
T04162
Name
(GenBank) ATP-grasp domain protein
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
lcp
Lysobacter capsici
Pathway
lcp00280
Valine, leucine and isoleucine degradation
lcp01100
Metabolic pathways
Module
lcp_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LC55x_3210
Enzymes [BR:
lcp01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
LC55x_3210
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
BT_MCC_alpha
Dala_Dala_lig_C
ATP-grasp
HlyD_3
HlyD_D23
PB2_627-dom
GARS_A
ATP-grasp_3
ATPgrasp_ST
GCV_H
Motif
Other DBs
NCBI-ProteinID:
ALN86473
LinkDB
All DBs
Position
3636292..3638313
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AA seq
673 aa
AA seq
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MFEKILIANRGEIACRVIRTCRKLGIRTVAVYSEADADAQHVRQADEAYPIGGPRPADSY
LRGDAIIEVARRSGAQAIHPGYGFLSENADFADAVEAAGIAFIGPKAASMRKMGSKAGAK
ELMQAAGVPVVPGYTGEDQDPAHLHREADRIGYPLMIKAAHGGGGKGMRIVRDSGDFLAN
LESCQREARNAFGRDRVLLERYVEQPRHIEIQIFGDANGQVIHLNERECSAQRRYQKVLE
ESPSPFLSPQQRAQMGAAAVMAGHAIDYVNAGTVEFIVGQDGGFYFMEINTRLQVEHPVT
ELVTGLDLVEWQLRVAAGEPLPQPQDAIVQRGHAIEVRLYAEDPEAGFLPGSGKLERLRL
PQTDAHVRLDSGVIEGDTVTIFYDPMIAKLIVFDLDRPRALARLRAALAQCEIVGPKSNI
EFLERLARHPAVVGGTIDTGYLDRHLDEFMPAAKGDDDDGDRDLLIGATVAELLSQEQRT
REAASASNDPSSPWAIADGWRLGHGGRRSLAFVRRDERLELQAQGSGGEYRIEIPAQSEA
AYVVNGARLRGSELSLRIDGRARRLSALGDGTRVVMHDGERRLRLDAVPMYHHQQSAAAG
SGNHVNAPMPGRVVVVKAAPGDSVEAGQEVMVIEAMKMELSLKAPRAGTIAEVRAAAGDF
VEADAVLVTLETV
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaaagatcctgatcgccaaccgcggcgagatcgcctgtcgcgtcatccgcacc
tgccgcaagctcggcatccgcaccgtcgcggtctactccgaagccgacgccgatgcccag
cacgtgcgccaggccgacgaggcctacccgatcggcgggccgcgtccggccgacagctac
ctgcgcggcgacgcgatcatcgaggtggcacggcgcagcggcgcgcaggcgatccatccc
ggttacggcttcctcagcgagaacgccgatttcgccgacgcggtcgaagccgcgggcatc
gccttcatcggcccgaaagccgcgtcgatgcgcaagatgggcagcaaggccggggccaag
gaactgatgcaggccgccggcgtgccggtggtgcccggttacaccggcgaagaccaggac
ccggcccatctgcaccgcgaagccgatcgcatcggttatccgctgatgatcaaggccgcg
cacggcggcggcggcaagggcatgcggatcgtgcgcgacagcggcgacttcctcgccaat
ctggaaagctgccagcgcgaagcgcgcaacgccttcggtcgcgaccgggtgctgctggag
cgctatgtcgaacaaccgcgccatatcgaaatccagatcttcggcgacgccaacggccag
gtgatccacctcaacgagcgcgagtgctcggcccagcgccgctatcagaaggtgctggaa
gaatcgccctcgccgttcctgagcccgcagcagcgcgcgcagatgggcgccgcggcggtg
atggccggccacgcgatcgactacgtcaacgccggcacggtcgagttcatcgtcggccag
gacggcggtttctatttcatggaaatcaatacgcgtctgcaggtcgagcatccggtcacc
gaactggtcaccggcctggatctggtcgaatggcagctgcgcgtcgccgcgggcgagccc
ttgccgcagccgcaggacgcgatcgtccagcgcggccacgcgatcgaagtgcgcctgtac
gccgaagacccggaagccgggttcctgcccggctcgggcaagctcgaacgcctgcgcctg
ccgcagaccgatgcgcacgtgcgcctggattcgggcgtgatcgaaggcgacacggtgacg
atcttctacgacccgatgatcgccaagctgatcgtgttcgacctcgatcgtccgcgggcc
ttggcgcgtttgcgcgcggcgctcgcgcagtgcgagatcgtcgggccgaaatccaatatc
gaattcctcgaacgcctcgcccgtcatccggcggtggtcggcggcacgatcgacaccggc
tatctggatcgccatctcgacgagttcatgccggcggcgaagggcgacgacgacgacggc
gatcgcgacctgctgatcggcgcgaccgtggccgaactgctgagccaggaacaacgcacc
cgcgaagcggcatcggcgtcgaacgacccgagctcgccgtgggcgatcgccgacggttgg
cgcctgggccacggcggccgccgcagcctggccttcgtgcgtcgcgacgaacgcttggag
ctgcaggcgcagggcagcggcggcgagtaccggatcgaaattccggcgcagtccgaagcc
gcttacgtggtcaacggcgcgcgcctgcgcggcagcgaactgagcctgcgcatcgacggc
cgcgcgcgccggctgagcgcgctcggcgacggcacccgcgtggtcatgcacgacggcgaa
cgccgcctgcgcctggacgcggtgccgatgtaccaccaccagcaaagcgcggccgccggc
tcgggcaaccacgtcaacgcgccgatgcccggccgcgtggtcgtggtcaaggccgcgccc
ggcgacagcgtcgaagccggccaggaggtgatggtgatcgaggcgatgaagatggagctg
agcctgaaggcgccgcgcgcggggacgatcgcggaagtgcgcgccgcggctggggatttt
gtcgaggctgatgcggtgttggtgacgttggaaaccgtctga
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