Lysobacter capsici: LC55x_3287
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Entry
LC55x_3287 CDS
T04162
Symbol
pgaA
Name
(GenBank) poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA
KO
K11935
biofilm PGA synthesis protein PgaA
Organism
lcp
Lysobacter capsici
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PgaA_barrel
TPR_19
Porin_4
TPR_14
TPR_20
TPR_17
TPR_9
Motif
Other DBs
NCBI-ProteinID:
ALN86549
UniProt:
A0A0S2FT43
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Position
3711848..3713938
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AA seq
696 aa
AA seq
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MPIQHRLALSIALATAAATCPVTSAFAVTRHESAPDPLPEIERLRSDRQWLAALAHIERA
QTQRPDDEQLYRLQVLTLADLGGAERAWALAQARPGLFSEAERQRLSSDRLARRVLWGTL
FPENEAQRLTEMRDARGILEQHRAGQTPAQQQAELRTRFDELVMLNHLERHAEVVQRYRA
LQAENVQLPMYALAKVGASLLADKHPEEAASVLEHVVREWPDDNDSQLQLAYAYSESERF
DDAYAQLDKIKAAEPAFVRVKGAKESHENWRHYDADSHQTMIRLYGEDTVGAQRRLEEMA
AIGPNNAGLQSDLGVTYQKRGWTDRALERFQMASTMEPTNVGARIGQIGAYLEHDRVDLA
RPIHDELLANRARDVQVKQMAQSWDQRLGWQWLIGTAGGRSDARGGGATASPLGSRDGEH
RFEIMSPLIHDRWRLTAHARDAWADYPDGALRTERVHDRRSGVGGLYAYDRLTVGFGVDR
ANDRWLDRSDRTGYYLDAGWRFNDLWRGTASWYRGTPEASLQARRAGIDADAFSLGLRYT
PSERTSLSASAQQLRYSDDNTRTAFGLSGAQRLYTQPHLLIDGLADLATSRASRRDSEVP
YFNPSRDASLNLGLRIDHLAWRRYERHFRQRLTVQAGPYWQQGYGSYWVPQVRYEHEWRF
ATGRTLDYGINWSRPVYDGVREDRLGFDMTFRWGEQ
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgccgatacagcatcgtcttgccctctccatcgccttggcgaccgcagccgcaacctgt
cctgttacgtcagcttttgccgttacgcgtcacgaatccgcccccgaccccctgcccgaa
atcgagcgcctgcgctcggatcggcaatggctggccgcgcttgcgcatatcgaacgtgca
caaacccagcgcccggatgacgagcaactgtaccggctgcaagtcctgaccctggccgac
ctgggcggcgccgagcgcgcctgggccctcgcgcaggcgcggccgggcttgttcagcgag
gccgaacgccagcgcctgagctcggaccgcctggcccgccgggtgctgtggggcaccctg
tttcccgagaacgaagcccagcgcctgaccgagatgcgcgatgcccgcggcatcctcgaa
cagcaccgcgccggccagaccccggcgcagcagcaggccgagctgcgcacgcgtttcgac
gaactggtgatgctcaaccatctcgagcgccatgccgaggtcgtgcagcgctatcgcgcg
ctgcaggccgaaaacgtgcaactgccgatgtacgcgctggccaaggtcggcgcgtcgctg
ctcgccgacaagcatcccgaggaagccgcgagcgtgctcgagcacgtcgtgcgcgaatgg
cccgacgacaacgactcgcagctgcaactggcctacgcctattccgaaagcgagcgcttc
gacgacgcctacgcgcaactggacaagatcaaggccgccgaaccggcgttcgtgcgggtc
aagggcgccaaggaaagccacgagaactggcgccactacgacgccgacagccaccagacc
atgatccgcctgtacggcgaagacacggtcggcgcgcagcggcgcctggaggaaatggcc
gcgatcgggccgaacaacgccggcctgcagagcgacctgggcgtcacctatcaaaagcgc
ggctggaccgatcgcgcgctggaacgtttccagatggccagcaccatggaaccgaccaat
gtcggcgcgcgcatcggccagatcggcgcgtacctggaacacgaccgggtcgacctcgcc
cgtccgatccacgacgaattgctggccaatcgcgcgcgcgacgtgcaggtcaagcagatg
gcgcaatcctgggatcagcgcctgggctggcaatggctgatcggcaccgccggcggccgc
agcgacgcgcgcggcggcggcgcgaccgcgtcgccgttgggctcgcgcgatggcgagcac
cgtttcgaaatcatgagcccgctgatccacgaccgctggcgcctgaccgcgcatgcgcgc
gacgcctgggccgattatcccgacggcgcgctgcgcaccgagcgcgtccacgaccgccgc
agcggcgtcggcggcctgtacgcctacgatcgcctgaccgtcggcttcggcgtcgatcgc
gccaacgatcgctggctcgatcgcagcgatcgtaccggttactacctcgatgccggttgg
cgcttcaacgatctgtggcgcggcaccgcgtcgtggtatcgcggcacgccggaggcttcg
ttgcaggcgcgccgcgccggcatcgatgccgacgcgttcagtctgggcctgcgctacacc
ccgagcgaacgcacatccttgagcgcgagcgcgcagcaactgcgctacagcgacgacaac
acccgcaccgcgttcggcctgagcggcgcgcagcgcctgtacacgcagccgcatctgctg
attgacggcctggccgatctggcgaccagccgcgccagtcgccgcgacagcgaggtgccc
tatttcaatcccagccgcgacgcgtccttgaacctcggcctgcgcatcgatcacctggcc
tggcgccgctacgagcgccatttccgccagcgcctgaccgtacaggccgggccgtattgg
cagcagggctacggcagctactgggtgccgcaggtgcgctacgaacacgaatggcgtttc
gccaccggccgcacgctcgactacggcatcaactggtcgcgccccgtctacgacggcgtg
cgcgaggaccggctgggcttcgatatgactttccgttggggtgagcaatga
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