Lysobacter capsici: LC55x_3469
Help
Entry
LC55x_3469 CDS
T04162
Symbol
dnaX
Name
(GenBank) DNA polymerase III, subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
lcp
Lysobacter capsici
Pathway
lcp03030
DNA replication
lcp03430
Mismatch repair
lcp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LC55x_3469 (dnaX)
03430 Mismatch repair
LC55x_3469 (dnaX)
03440 Homologous recombination
LC55x_3469 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcp03032
]
LC55x_3469 (dnaX)
03400 DNA repair and recombination proteins [BR:
lcp03400
]
LC55x_3469 (dnaX)
Enzymes [BR:
lcp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LC55x_3469 (dnaX)
DNA replication proteins [BR:
lcp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LC55x_3469 (dnaX)
DNA repair and recombination proteins [BR:
lcp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LC55x_3469 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
RuvB_N
AAA_16
DNA_pol3_tau_5
AAA_22
AAA_14
AAA_5
AAA_18
Mg_chelatase
PIF1
AAA_30
AAA_7
AAA_assoc_2
TsaE
AAA_19
nSTAND3
AAA_2
DUF7194
DUF3646
Motif
Other DBs
NCBI-ProteinID:
ALN86728
LinkDB
All DBs
Position
complement(3902574..3904844)
Genome browser
AA seq
756 aa
AA seq
DB search
MSYLVLARKWRPKRFAELVGQEHVVRALTNALGTGRVHHAFLFTGTRGVGKTTIARIFAK
SLNCEHGTSADPCGQCSACLDIDAGRYIDLLEIDAASNTGVDDVREVIDNAQYMPSRGRV
KVYLIDEVHMLSKSAFNALLKTLEEPPGHVKFLLATTDPQKLPVTVLSRCLQFNLKRLDE
QQISGQMTRILAAEGIGVDESAIRQLAKAADGSLRDGLSLLDQAIAYAGAGGDAPLEGAA
VAAMLGSVDRTRVGAVLSALADGEGQRLLDEVATLAEFSPDWGSVLEALGDALHRIQVRQ
LVPEALVEADGVDVDHLAAQLRPELVQLWYQMSVNGRRDLPLAPSPRAGFEMSVLRMLAF
RPSAAGEPSSPGPGPSSGGRSEPVRSANAAAQAAAAIREMGTPGREAGSTQSASVHSAPV
QAAPKQTPPMHNPARDAAPPPREATPSREQTDDRPPWVLPEQAPARAAPPVSAELATPAP
SRSEPVAPRTAPAFPDSEPALSVRVSEPRPADAFVAVRDEPLWPEDEPLHDKPPARVATA
AVEAKPEPRVEAKAEPAPIETRAEPMREPVRAPAPTQAAPVQAPMPSEPPRDDMFAAPSA
APAAQAPSSEPITMPARAAATGPSSAGIADDDAWHAIVDASGLRGPARILAEHAGFIGYA
DGVLNLSLSPDDDHLRAPALVQRVADALATRLGVAPQIRFETVKSGESLHARNQRARDQR
QAAAEDMFMNDPDVRRLIEDHGAKVVADSIRPFDDA
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatctcgtcctcgcccgcaaatggcgccccaagcgtttcgccgaactggtcggg
caggagcacgtggtacgcgcgctgaccaatgcgctcggcaccggccgcgtccaccacgcc
ttcctgttcaccggtacccgcggcgtcggcaagaccacgatcgcgcgcatcttcgccaag
tcgttgaactgcgagcacggcacctcggccgacccgtgcgggcagtgcagcgcctgtctg
gacatcgacgccggccgctacatcgacctgctcgagatcgacgccgccagcaataccggt
gtcgacgacgtgcgcgaggtgatcgacaacgcccagtacatgcccagccgcggacgggtc
aaggtctatctgatcgacgaagtccacatgctgtcgaagtcggcgttcaacgcgctgctc
aagacgctggaggagccgccggggcacgtcaaattcctgctcgccaccaccgacccgcag
aaactgccggtgacggtgctgtcgcgctgcctgcagttcaacctcaagcgcctggacgag
cagcagatcagcgggcagatgacccgcatcctcgccgccgagggcatcggcgtggacgaa
tcggcgatccgccagttggccaaggccgccgacggcagtctgcgcgacggtctgtcgctg
ctcgatcaggcgatcgcgtacgccggcgcgggcggcgatgcgccgctggagggcgccgcg
gtcgcggcgatgctgggttcggtcgatcgcacccgggtcggcgcggtgctgtcggcgctg
gccgacggcgagggtcagcgtctgctcgatgaggtcgcgaccctggccgaattctcgccg
gactggggcagcgtgctcgaagcgctcggcgatgccctgcaccggatccaggtgcggcag
ctggtgcccgaggccctggtcgaggccgacggggtcgatgtcgatcatctggccgcgcaa
ctgcggcccgagctggtgcagctgtggtaccagatgagcgtcaacggccgccgcgatctg
ccgctggcgccgagcccgcgcgcggggtttgagatgagcgtgctgcgcatgctcgcgttc
cggccgagcgcggcgggcgaaccgtcctcgcccggccccggcccgtcctcgggcggtcgc
agcgaaccggtgcggtcggccaatgccgccgcgcaggccgccgcggcgattcgcgagatg
ggcacgccgggccgcgaggctgggtcgacgcagagcgcatcggtccacagtgcgccggtt
caagccgcgccgaaacagacgccaccgatgcacaacccggctcgcgacgccgcgccgccg
ccgcgcgaggcgacgccttcgcgcgagcagaccgacgatcggccgccgtgggtgctgccc
gagcaggcgcctgcgcgcgccgcgccgccggtatccgccgaactcgcaacgcccgcgccg
tcgcgcagcgagcctgttgcgccgcgcactgcgccggctttcccggacagcgagcctgcg
ctgtcggtgcgggtcagcgagcccaggcccgcggatgctttcgtcgcggtccgcgacgag
ccgctgtggccggaagacgaacccttgcacgacaagccgccggcgcgggtcgccacggcg
gcggtcgaagccaagcccgaaccacgggtcgaagcgaaggccgaaccggccccgatcgaa
acccgggccgagccgatgcgcgaacccgtccgcgccccggcgccgacgcaagccgcaccg
gtgcaagcgccgatgcccagcgaaccaccgcgcgacgatatgttcgccgcgccgtccgca
gctccggccgcacaggcacccagctccgagccgatcaccatgcccgcgcgcgccgcggcg
acgggtccgtcgtccgcgggcatcgccgacgacgacgcctggcacgccatcgtcgatgcc
agcggcctgcgcggcccggcccggatcctggccgagcacgccggtttcatcggctacgcc
gatggcgtgctgaacctgtcgctcagccccgacgacgaccatctgcgcgcgccggccctg
gtccagcgggtcgccgatgcgctggccacgcgcctgggcgtcgcgccacagatccgcttc
gaaaccgtcaaatccggcgagtcgctgcacgcgcgcaaccagcgcgcgcgcgaccagcgc
caggcggcggccgaggacatgttcatgaacgatcccgatgtgcgccggctgatcgaggat
cacggcgccaaggtcgtggccgactcgatccggccgttcgacgacgcctga
DBGET
integrated database retrieval system
