Lysobacter capsici: LC55x_3496
Help
Entry
LC55x_3496 CDS
T04162
Symbol
dnaQ
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lcp
Lysobacter capsici
Pathway
lcp03030
DNA replication
lcp03430
Mismatch repair
lcp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LC55x_3496 (dnaQ)
03430 Mismatch repair
LC55x_3496 (dnaQ)
03440 Homologous recombination
LC55x_3496 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcp03032
]
LC55x_3496 (dnaQ)
03400 DNA repair and recombination proteins [BR:
lcp03400
]
LC55x_3496 (dnaQ)
Enzymes [BR:
lcp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LC55x_3496 (dnaQ)
DNA replication proteins [BR:
lcp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LC55x_3496 (dnaQ)
DNA repair and recombination proteins [BR:
lcp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LC55x_3496 (dnaQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
YggL_50S_bp
Motif
Other DBs
NCBI-ProteinID:
ALN86753
LinkDB
All DBs
Position
complement(3928796..3929527)
Genome browser
AA seq
243 aa
AA seq
DB search
MRQIILDTETTGLSWERGNRVVEIGCVEFVERRPSGRTYHQYIKPDCDFEAGAQEVTGLS
LERLANEPTMEQVVDEFLEFIKGAELIIHNAAFDVGFLNNELSICGAQYGKLADHVPNIE
DSLLLARQRYPGQRNSLDALCKRLGVDNSHRQLHGALLDAQLLGEVYIGLTSGQEEIGFG
DPAAIAAQQSPASFQIDPGAVRPRVIVLADEFAAHQARLEKLRKKAGKCVWDAFDPPAVV
AEA
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcaaatcatcctagataccgaaaccaccggcctgagctgggaacgcggcaaccgc
gtggtcgaaatcggctgcgtcgaattcgtcgagcgccgcccgagcggtcgcacctaccac
cagtacatcaagcccgattgcgatttcgaggccggcgcgcaggaagtcaccggcctgtcg
ctggagcgtctggccaacgagccgacgatggagcaggtggtcgatgaattcctcgaattc
atcaagggcgccgagctgatcatccacaacgcggccttcgacgtgggcttcctcaacaac
gagctatcgatctgcggcgcgcagtacggcaagttggccgaccacgttcccaacatcgaa
gattcgctgctgctcgcgcgccagcgttaccccggccagcgcaattcgctggacgcgttg
tgcaaacgcctgggcgtggacaattcgcaccgacagctgcacggcgcgctgctcgacgcc
cagttgctgggcgaggtctacatcggcctgacctcgggccaggaagagatcggcttcggc
gatccggccgcgatcgccgcgcagcagagcccggcgagtttccagatcgatccgggcgcg
gtgcggccgcgggtgatcgtgctcgccgacgaattcgccgcgcatcaggcgcggctggaa
aagctgcgcaagaaggccggcaagtgcgtgtgggatgcgttcgatccgccggcggtggtg
gccgaggcgtaa
DBGET
integrated database retrieval system
