Lysobacter capsici: LC55x_3735
Help
Entry
LC55x_3735 CDS
T04162
Name
(GenBank) bacterial regulatory, tetR family protein
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcp03000
]
LC55x_3735
Transcription factors [BR:
lcp03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
LC55x_3735
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_N
TetR_C_13_2
TetR_C_13
Motif
Other DBs
NCBI-ProteinID:
ALN86992
LinkDB
All DBs
Position
complement(4166565..4167191)
Genome browser
AA seq
208 aa
AA seq
DB search
MRYDSEHKLKTRERVLAVAANAIRSQGPHRVGVAAVMSEAGLTHGGFYAHFASKDELITA
AIDHMFIDARARIDHHVYGDKPPAQALTAYIDFYLSARHRDAMGKGCPVAALAADVPRLG
AASRERFSAGVAALSERIAAPLAQLGYADAAALSRSVLAELLGTLAIARSEPDGARSDAI
LADARGLLKRRLGLDDAGLDDNKRGAQR
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgcgctacgacagcgaacacaaactcaagacccgcgagcgcgtgctcgcggtcgcggcc
aacgccatccgcagccagggcccgcaccgggtcggcgtggccgcggtgatgagcgaggcc
ggcctgacccacggcggcttctacgcgcatttcgcttcgaaggacgagctgatcaccgcc
gcgatcgatcacatgttcatcgacgcgcgcgcgcgcatcgaccatcacgtttacggcgac
aaaccgccggcgcaggcgttgacggcctacatcgatttttatctgtcggcgcgccatcgc
gacgcgatgggcaagggctgcccggtcgcggcgctggccgccgacgtgccgcgcctgggc
gcggcctcgcgcgaacgtttcagcgccggcgtggccgccttgagcgagcgcatcgccgcg
ccgctggcgcaactgggttacgccgatgcggcggccttgtcgcgttcggttctggccgaa
ttgctgggcaccctggcgatcgcgcgcagcgaacccgatggcgcgcgttcggacgcgatc
ctcgccgacgcgcgcggcttgctcaaacgccggctgggtttggatgacgcgggtctggac
gacaacaaaaggggagcgcagcgatga
DBGET
integrated database retrieval system
