Lysobacter capsici: LC55x_3754
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Entry
LC55x_3754 CDS
T04162
Name
(GenBank) tonB dependent receptor family protein
KO
K02014
iron complex outermembrane recepter protein
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcp02000
]
LC55x_3754
Transporters [BR:
lcp02000
]
Other transporters
Pores ion channels [TC:
1
]
LC55x_3754
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ALN87011
LinkDB
All DBs
Position
complement(4183565..4186150)
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AA seq
861 aa
AA seq
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MSIALAAPLAQADEAAATAAPGVTLDAVQVTGSNLKRSDEAGVNPVLVIDRVQIEKSGKL
TVSDLLRSLTVNSGNSFNEQYTGSFANGSAGVSLRGLSQKNTLVLVNGYRVASYGFAQNT
QDNFVDLNALPLGAIERVEILKDGASALYGSDAIAGVVNLILRRKIEGVEVDASYGAATQ
GGIDQQSLGLRAGHGDPDKDGYSLRFSLDVFKRGQLNGDERALTRDGDYRDQPGGRLAGW
STQGGAFLSNPRAPVAFDCQPGTQSRPYSDFGSPLPGNACAFNTQPYRTLIPEVERYQAL
VAGDVWFNDKVQGFAEILYSTSNNSTYFSAPMTVGAGLRAYDRSSGRLVDIPAVLPVGHP
NNPNATPTPFEYSFLDLGARYKINKSEFSRILFGLRGKGEVWDWDVAASHSESQQREYVR
NFLNRYAFQQVLADGSYDFLNPSRTPGALEALRLSTRRPGTYRLSTLSGKVSGFPWQWRA
GDVGVAAGVEFRDEAQDAGTSPQVLSGTELRPAINLIDGDRRVAAAFFELSLKPWQQVEV
QLAGRGDHYSDFGSAFSPKLGIRWQVSDDWLLRLNASRGFRAPSLPEIAQSTTISYGSVI
DPFDPVQPGASRGVTVLRAGNPDLKAERSSNINLGVLWAPDADTSLGVDLYRIRQDDLIA
PDNVQFVVSNPQSNPGRITRDAQGRLQLVENRYSNQGTLTTTGFDIEGRKVWHAGDDRWT
LDGTWTRLLSYEQPQVAGQGALEGAGGNRFGALPKWRGITSLAYARGDWNAQLSWRYIGG
YKQQVVDARSNPGLSDKVDDHHQFDLYLGYEGLRDTTLYLSVQNLADKDPPFDPAGGALP
YDISQYDALGRFVTVGVKHKF
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgatcgcgctcgccgcgccgctggcgcaggccgacgaagccgcggcgaccgccgcg
cccggcgtcaccctcgatgcggtccaggtcaccggcagcaacctcaagcgcagcgacgaa
gccggggtcaatccggtgctggtgatcgatcgcgtgcagatcgaaaagagcggcaagctc
accgtgtcggatctgctgcgcagcctcaccgtcaacagcggcaacagcttcaacgagcaa
tacaccggcagcttcgccaacggctcggccggcgtatcgctgcgcggcctgagccagaag
aacacgctggtgctggtcaacggctaccgcgtggcctcgtacggtttcgcgcagaacacc
caggacaacttcgtcgatctcaatgcgctgccgctgggcgcgatcgagcgggtggaaatc
ctcaaggacggcgcctcggcgctgtacgggtccgacgcgatcgccggcgtggtcaatctg
atcctgcggcgcaagatcgaaggcgtcgaggtcgatgcgtcctacggcgcggccacccag
ggcggcatcgatcaacaaagcctcggcctgcgcgccggtcacggcgatccggacaaggac
ggttacagcctgcgtttcagcctcgacgtgttcaagcgcgggcaactcaacggcgacgag
cgcgcgttgactcgcgacggcgattaccgcgatcaacccggcgggcgactggccggctgg
tcgacccagggcggtgcgtttctgagcaacccgcgcgcgccggtcgcgttcgactgccaa
cccggtacccagtcgcgtccgtacagcgacttcggcagcccgctgccgggcaacgcctgc
gcgttcaacactcagccgtaccgcactttgattcccgaggtggagcgctatcaggccttg
gtcgccggcgacgtgtggttcaacgacaaggtccagggcttcgccgagatcctctacagc
accagtaacaacagcacgtatttcagcgcgccgatgacggttggcgccggcctgcgcgcc
tacgatcgcagttccggccgtctggtcgatattccggcggtgctgccggtcgggcatccg
aacaacccgaacgcgacgccgacgccgttcgagtattccttcctcgacctgggcgcgcgc
tacaagatcaacaagtcggaattctctcgcatcctgttcggcctgcgcggcaagggcgag
gtgtgggactgggacgttgccgccagccattcggaaagtcagcagcgcgagtacgtgcgc
aatttcctcaaccgttatgcgttccagcaggtgctggccgacggcagctacgatttcctc
aatccctcgcgcacgccgggcgcgctcgaagcgctgcgcctgtcgacgcgccgcccgggc
acgtatcgcctgagcacgctcagcggcaaggtctcgggtttcccgtggcaatggcgcgcg
ggcgatgtcggcgtcgccgccggggtggaattccgcgacgaagcccaggacgcgggcacc
agtccgcaggtgttgtcgggcaccgagctgcgcccggcgatcaatctgatcgacggcgat
cgccgcgtcgccgccgcgttcttcgagttgagcctgaaaccgtggcaacaggtggaagtg
caactggccggccgcggcgatcactacagcgacttcggcagcgcgttctcgcccaagctc
ggcatccgctggcaggtcagcgacgattggctgctgcgcttgaacgcctcgcgcggtttc
cgcgcgccgtcgctgccggaaatcgcccagagcaccaccatcagctacggcagcgtgatc
gatccgttcgatccggtgcagccgggcgcctcgcgcggcgtgaccgtgctgcgcgccggc
aatcccgatctgaaggccgagcgttccagcaacatcaacctgggcgtgttgtgggcgccc
gatgccgataccagcctcggcgtggatctgtaccgcatccgtcaggacgacctgatcgcg
ccggacaacgtgcagttcgtggtgtccaatccgcagagcaatccgggccgtatcacgcgc
gatgcgcagggccggctgcaactggtcgagaaccgctactccaaccagggcacgctgacc
acgactggtttcgatatcgaaggccgcaaggtctggcatgccggcgacgaccgctggacc
ctcgacggcacctggacccggttgctgagctacgagcagccgcaggtggccgggcagggc
gcgctggaaggcgccggcggcaaccgcttcggcgcgctgccgaagtggcgcggcatcacc
tcgctggcgtatgcgcgcggcgactggaacgcgcagctgtcgtggcgttatatcggcggc
tacaagcagcaggtggtcgatgcgcgcagcaatccgggcctgagcgacaaggtcgacgat
caccaccagttcgatctgtacctgggttacgagggcctgcgcgacacgaccttgtatttg
tcggtgcagaacctggccgacaaggacccgccgttcgatccggccggcggcgcgctgccg
tacgacatcagccagtacgacgccttgggccgcttcgtcaccgtgggagtcaagcacaag
ttctga
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