Lysobacter capsici: LC55x_3867
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Entry
LC55x_3867 CDS
T04162
Name
(GenBank) outer membrane beta-barrel domain protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcp02000
]
LC55x_3867
Transporters [BR:
lcp02000
]
Other transporters
Pores ion channels [TC:
1
]
LC55x_3867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
Autotransporter
DUF748
DUF3575
SlipAM
Motif
Other DBs
NCBI-ProteinID:
ALN87124
LinkDB
All DBs
Position
complement(4309150..4310229)
Genome browser
AA seq
359 aa
AA seq
DB search
MNKKLLCAALLGGLSLAQVASAQDFDDRWYLTGSAGMNIQDNDRGTRNAPFGAIGLGKFL
NKNWSLDGELNYQNPKFDANQDANWSQYGISLDLRRHFVTEGRNWNPYLLMGLGYQRSEE
EYFIPSPLSPANRKDGNFAAKVGLGVQGDLGRVGIRTELAYRADFDDQSVNAREEDWFGD
VLASVGIIVPLGPEPVAAVAPAPEVQPGCADKDDDGDGVNNCDDKCPGSQAGQTIGPDGC
PVPVTIDLKGVNFDFDKATLRPDAVAILSEASEILKRYPDLKVEVAGHTDLCGKDDYNQK
LSERRAKAAYDYLTSNGVDAGRLIGPVGYGESRPLEPTAQTMPACKSEKNRRTELNVQN
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaaactcctctgcgccgccctgctgggtggcctgagcctcgcgcaggtcgcc
agcgcccaggacttcgacgaccgttggtacctgaccggctcggccggcatgaacatccag
gacaacgaccgcggcacccgcaatgctccgttcggcgcgatcggcctgggcaagttcctg
aacaagaactggtcgctcgacggtgagctgaactatcagaacccgaagttcgacgccaac
caggacgccaactggagccagtacggcatctcgctggacctgcgccgccacttcgtcacc
gaaggccgcaactggaacccgtacctgctgatgggcctgggctaccagcgctcggaagag
gagtacttcattccgtcgccgctgtcgccggccaaccgcaaggacggcaacttcgccgcc
aaggtcggtctgggcgtgcagggtgacctgggccgcgtcggcatccgcaccgagctggcg
taccgcgccgacttcgacgaccagagcgtgaatgcacgtgaagaagactggttcggcgac
gtgctggcctcggtcggcatcatcgtcccgctgggtccggaacccgttgccgccgtggct
ccggccccggaagtgcagccgggctgcgcggacaaggacgacgacggcgacggcgtgaac
aactgcgacgacaagtgccccggttcgcaggctggccagaccatcggtccggacggctgc
ccggtgccggtcaccatcgacctgaagggcgtgaacttcgacttcgacaaggcgaccctg
cgtcctgacgcggtggcgatcctgagcgaagcgagcgaaatcctgaagcgttaccccgac
ctgaaggtcgaagtcgccggtcacaccgacctgtgcggcaaggacgactacaaccagaag
ctgtcggagcgtcgcgcgaaggctgcgtacgactacctgaccagcaacggtgtggacgcg
ggccgtctgatcggaccggtgggctacggcgaaagccgtccgctggagccgaccgcgcag
accatgccggcgtgcaagagcgagaagaaccgccgcaccgagttgaacgttcagaactaa
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