Lysobacter capsici: LC55x_3880
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Entry
LC55x_3880 CDS
T04162
Name
(GenBank) tonB dependent receptor family protein
KO
K02014
iron complex outermembrane recepter protein
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcp02000
]
LC55x_3880
Transporters [BR:
lcp02000
]
Other transporters
Pores ion channels [TC:
1
]
LC55x_3880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ALN87137
LinkDB
All DBs
Position
complement(4322087..4325062)
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AA seq
991 aa
AA seq
DB search
MSSALIAALILPVAGAAFAQDATKPDAEAPATETTTAATSLETVTVTGSRIGRDTFTSVS
PLQVITREETTLAGFNSAAGALQSTAVTGGSAQINNAYGGFVTNGGPGANTLGLRGMDPT
RTLILLNGRRVAPAGSRGSVGSADLNVLPTSMIDRVEVLKDGASSIYGSDAVAGVVNIIT
RKNLNGFSAEAQYNVTEDGGGDETRYSLSWGKTSDRFSISGSFEAYDRDELTLGDRDWTR
CNTYYRRTVNAVTGEVGAWGSADPIDYMTGKPKCYPAGNSAGVNGVTINTIGTNLRTGVG
APGATGTTFNRWRPNAAITTGLPGFEGVGGGSTTDLNVRDTFDPRTLNRSLISPVEVKTG
FVQGAFDLQTLGNAEAYFEVLANRRESSQTGFKQLSLDYARGSILLPASLQTAQSQAAPT
ETTNGRPLGVRAFIGAGNDKNSQTVDFWKATGGLRGDFVFTDWHYDFMVSKSRSDSDYTF
ESFLIDRMSRSLDVVAAPGGGFVCRDPSGGCVAAPALSSAVIGGQLPQTWRNYVYQPVTG
NTLYEESTVNFSIDGPLFALPYGEVRGAFGLEYRKAKIDDTPPLDSINNNLLGLTSAAPT
RGTDSVKEIYGEIEVPLLSGLKGAEELVLNASARYTDYKSYGGDHTYKIGGLWTPVSWLT
FRASYGTSYRAPALFEQFLGGTSGFIASGNDPCSDLAANDPSIALLANCAAEGLAPGYLS
TNSVKVITAGGAEQGLKAETSKNFTTGIILQPEFSKSFGDLSFAVDYYKIEVENGVSRAG
GGEILQRCYNDPEFRTGGGFCRLVDARTPGTNALTVHDSYVNLATDRVRGLDFTVRYVRD
IGPGTLRSTLQATHFLEQSSKLFAEDELDDYNGNVGSPSYTATLDTTYEWKKWKVRYGLE
WVDATQSYGFYGVDRATAPYKMHTEDYFLSHLSTQYKWDKWSVTGGVRNLFGADPKVISH
SGAYNRVGNAPLYSGYDYVGRTFFMNVQADF
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
ttgagttcggcgctgatcgccgcgctgattctgccggtcgccggcgcggcgttcgcgcaa
gacgccaccaagccggacgcggaagcgccggccacggaaaccacgaccgccgcgaccagc
ctggagacggtcaccgtcaccggttcgcgcatcggccgcgacacctttacctcggtctcg
ccgctgcaggtcatcacccgcgaagaaaccaccctggccggcttcaactcggccgccggc
gcgctgcagagcaccgccgtcaccggcggttcggcgcagatcaataacgcctacggcggc
ttcgtcaccaacggtggcccgggcgccaacaccctcggcctgcgcggcatggacccgacc
cgcaccctgatcctgctcaacggccgccgcgtggcgccggcgggttcgcgcggttcggtc
ggttcggccgacctcaacgtgctgccgacctcgatgatcgaccgcgtggaagtgctcaag
gacggcgcctcgtcgatctacggctccgacgcggtcgccggcgtggtcaacatcatcact
cgcaagaacctcaacggcttctcggccgaagcgcagtacaacgtgaccgaggacggcggc
ggcgacgaaacccgttactcgctgtcgtggggcaagacctccgaccgcttcagcatctcc
ggctcgttcgaagcctacgaccgcgacgagctgaccctgggcgaccgcgactggacccgc
tgcaatacctactaccgccgtaccgttaacgcggtcaccggcgaggtgggcgcgtggggc
agcgccgatccgatcgactacatgaccggcaagcccaagtgctacccggccggcaacagc
gccggcgtcaacggcgtcaccatcaacaccatcggcaccaacctgcgcaccggcgtcggc
gcgcccggcgcgaccggcaccacgttcaaccgctggcgcccgaacgcggccatcaccacc
ggcctgccgggcttcgaaggcgtgggcggcggttccaccaccgacctcaacgtgcgcgac
accttcgatccgcgcacgctcaaccgttcgctgatctcgccggtcgaagtgaagaccggc
ttcgtccagggcgcgttcgacctgcagacgctcggcaacgccgaagcctacttcgaagtc
ctggccaaccgccgcgaatccagccagaccggcttcaagcagctgtcgctggactacgcg
cgcggtagcatcctgttgccggcttcgttgcagaccgcccagtcccaggccgcgccgacc
gagaccaccaacggccgcccgctgggcgtgcgcgcgttcatcggcgccggcaacgacaag
aattcgcagaccgtggatttctggaaggcgaccggcggcctgcgcggcgacttcgtgttc
accgactggcattacgacttcatggtcagcaagtcgcgctcggattcggactacaccttc
gaatcgttcctgatcgaccgcatgtcgcgcagcctcgacgtggtcgccgcgcccggcggc
ggcttcgtctgccgcgatccctccggcggctgcgtcgccgcgccggcgctgagctcggcc
gtcatcggcggccagctgccgcagacctggcgcaactacgtctaccagccggtcaccggc
aacaccctgtacgaagaaagcaccgtcaacttcagcatcgacggcccgctgttcgcgctg
ccgtacggcgaagtgcgcggcgcgttcggtctggaataccgcaaggccaagatcgacgac
accccgccgctggattcgatcaacaacaacctgctgggcctgacctcggcggcgccgacc
cggggcaccgactcggtcaaggaaatctacggcgaaatcgaagtgccgctgctgtcgggt
ctgaagggcgccgaggaactggtgctcaacgcgtcggcgcgctacaccgattacaagtcc
tacggcggcgatcacacctacaagatcggcggcctgtggacgccggtgagctggctgacc
ttccgcgcgtcctacggcacctcgtaccgcgctccggcgctgttcgaacagttcctgggc
ggcacctcgggcttcatcgcctcgggcaacgatccgtgcagcgacctggccgccaacgat
ccgtcgatcgcgctgttggccaactgcgcggctgaaggtctggcgccgggttatctgtcc
accaatagcgtcaaggtcatcaccgccggcggcgccgagcagggcctgaaggcggaaacc
tcgaagaacttcaccaccggcatcatcctgcagccggaattctccaagagcttcggcgac
ctgtcgttcgctgtcgactactacaagatcgaagtcgaaaacggcgtgtcgcgcgccggc
ggcggcgagatcctgcagcgttgctacaacgatccggagttccgcaccggcggcggcttc
tgccgtctggtcgatgcgcgtaccccgggcaccaacgccctgaccgtgcacgacagctac
gtcaacctggccaccgaccgcgtgcgcggcctggacttcaccgtccgctacgtccgcgac
atcggcccgggcaccctgcgcagcaccttgcaggcgacccacttcctggagcagtccagc
aagctgttcgccgaggacgagctggacgattacaacggcaacgtcggctcgccgtcgtac
accgccaccctcgacaccacctacgagtggaagaagtggaaggtgcgttacggcctggag
tgggtcgatgcgacccagagctacggcttctacggcgtcgaccgcgcgaccgcgccgtac
aagatgcacaccgaggattacttcctctcgcatctgtcgacccagtacaagtgggacaag
tggtcggtcaccggtggcgtgcgcaatctgttcggcgccgacccgaaggtgatctcgcac
tcgggcgcctacaaccgcgtgggtaacgcgccgttgtacagcggctacgactacgtcgga
cgcacgttcttcatgaacgtccaggccgacttctga
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