Lysobacter capsici: LC55x_3898
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Entry
LC55x_3898 CDS
T04162
Name
(GenBank) tonB dependent receptor family protein
KO
K02014
iron complex outermembrane recepter protein
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcp02000
]
LC55x_3898
Transporters [BR:
lcp02000
]
Other transporters
Pores ion channels [TC:
1
]
LC55x_3898
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ALN87155
LinkDB
All DBs
Position
complement(4346084..4348450)
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AA seq
788 aa
AA seq
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MKYPLATPALVLAIWTALATAPVHADPREAAPAPETALDSAAGEAAGRDATTLDAVSVIG
MGETRQVQRIKLADIEKRAPGTSPQKILNKLPGISVQSNDAYGANEESQTISLRGFNQRL
LGYTLDGIPLGDNSYGNYNGLGISRALIGENLAGAELAAGIGSLGTASTSNLGGTLQYFS
SDPHSEFGLRLAQAFGSDSTRRTYARMDTGDHGGFSMYLSGSLLSADMWSKPGDNQDQNQ
VNLKALYQFGDGNRISAFVSSAETSQANFAYLSKGLLSRGSGWDWNLYKPDWQRALAAAY
CAPKPWPANQHRAGDPRCGFSGPAATIDDAYYASRALRTDHLAALAGEFNLGEGLTLKSQ
AYYHDDRGQGHWWSPGNYSYPNTPKAIPISIRSTNYGINRYGAMSSLAWEIGNHRIEGGF
WYESNHHDVQRNFYFIEGPVNDDRFLNDPDRRLFFQKYRINTRQAYLQDTISLLDGRMTV
DVGAKSTQVDMRARQVDPRAMEVPNASGRLETKDSFLPQLGVGYKLSEGQELFAAYTENV
AAFVGGGAGGPLAIGQAAFDVQKASLKPESSKTLEAGYRRVGETYQASFSIYKVKFDNRL
LSLNPCSSIEAGTRPECVTQFFNVGSVDSIGSELVFIWKPNAQFEWYNALSWNKSTYQDN
YIDSGKVVQTRDKRVVDVPDKMLSSELSYRNGPWLASVSGKYTGKRYYTYTNDNGFGGST
QFDAALRYTFEPVGPLRQWSIALNGSNLTDKRTASNLTAFSASDPQGKTFAFHANAPRQV
FLTIDAQF
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgaagtacccccttgccacgcctgcgctcgtgctggcgatctggaccgcgctggcgacc
gcgcccgttcatgccgatccgcgcgaggccgcgcccgcgcccgagaccgcgctcgacagc
gccgcgggcgaagcggcgggccgcgatgcgaccacgctcgacgcggtgtcggtgatcggc
atgggcgagacccgccaggtgcagcggatcaagctggcggatatcgaaaagcgcgcgccg
ggcaccagcccgcagaagatcctcaacaagctgccgggcatttcggtgcagtccaacgac
gcctacggcgccaacgaggaatcgcagaccatcagcctgcgcggcttcaaccagcgcctg
ctcggctacaccctcgacggcattccgctcggcgacaacagctacggcaactacaacggc
ctgggcatcagccgcgccttgatcggcgagaacctggccggcgcggaactggccgcgggc
atcggctcgctcggcaccgcctcgaccagcaacctcggcggcaccttgcagtacttctcc
tccgatccgcacagcgaattcggcctgcgcctggcccaggccttcggcagcgacagcacc
cgccgcacttatgcgcgcatggacactggcgatcacggcggtttctcgatgtatctgtcc
ggctcgctgctcagcgccgacatgtggtccaagcccggcgacaaccaggatcagaaccag
gtcaacctcaaggcgctgtatcagttcggcgacggcaaccggatcagcgcgttcgtgtcg
agcgcggaaaccagtcaggccaacttcgcctacttgtccaaggggttgctgtcgcgcggc
tcggggtgggactggaatctgtacaagcccgactggcagcgcgcgctcgccgccgcgtac
tgcgcgcccaagccgtggccggcgaaccagcaccgcgccggcgatccgcgttgcggcttc
agcggcccggcggcgaccatcgacgatgcctactacgccagccgcgcgctgcgcaccgac
catctggccgcgctggccggcgagttcaatctcggcgaaggcctgacgctgaaatcgcag
gcctattaccacgacgaccgcggccagggccattggtggtcgccgggcaattactcgtat
ccgaacacgcccaaggcgattccgatctcgatccgcagcaccaactacggcatcaaccgc
tacggcgcgatgagctcgttggcctgggagatcggcaaccaccgcatcgaaggcgggttc
tggtacgagagtaaccaccacgacgtgcagcgcaatttctatttcatcgaaggcccggtc
aacgacgaccgtttcctcaacgatcccgaccgccgcctgttcttccagaagtaccgcatc
aacacccgccaggcctatctgcaggacaccatcagcctgctcgacggccgcatgaccgtg
gacgtcggcgccaagagcacccaggtcgacatgcgcgcgcgccaggtcgatccgcgcgcg
atggaagtgcccaacgcgagcgggcgtctggaaaccaaggacagtttcctgccgcagctc
ggcgtcggctacaaactcagcgaagggcaggagctgttcgcggcctacaccgaaaacgtc
gcggccttcgtcggcggcggcgccggcggcccgctggcgatcggccaggccgcgttcgac
gtgcagaaggccagcctcaagcccgaatcgtccaagaccctggaagcgggctatcgtcgc
gtgggcgagacctatcaggcctctttcagcatctacaaggtcaagttcgacaaccgcctg
ctgtcgctgaacccgtgttcgagcatcgaagccggcacgcggccggagtgcgtcacccag
ttcttcaacgtcggttcggtcgacagcatcggcagcgagctggtcttcatctggaagccc
aacgcgcagttcgagtggtacaacgcgctgtcgtggaacaagtcgacttatcaggacaat
tacatcgacagcggcaaggtcgtgcagacccgcgacaagcgcgtggtcgatgtgccggac
aagatgctgtcgagcgagttgagctatcgcaatgggccgtggctggcgagtgtgagcggc
aagtacaccggcaagcgttattacacctacaccaacgacaatgggttcggtggttcgact
cagttcgacgcggccttgcgttacaccttcgagccggtggggccgttgcggcagtggtcg
atcgcgctcaatggcagcaatctcaccgacaagcgtacggccagcaatctgacggcgttc
agcgcctcggatccgcaggggaagacgttcgcgtttcatgccaatgcgccgcggcaggtg
tttttgacgattgatgcgcagttttga
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