Lysobacter capsici: LC55x_3930
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Entry
LC55x_3930 CDS
T04162
Symbol
rpsD
Name
(GenBank) ribosomal protein S4
KO
K02986
small subunit ribosomal protein S4
Organism
lcp
Lysobacter capsici
Pathway
lcp03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
LC55x_3930 (rpsD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
lcp03011
]
LC55x_3930 (rpsD)
Ribosome [BR:
lcp03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
LC55x_3930 (rpsD)
Bacteria
LC55x_3930 (rpsD)
Archaea
LC55x_3930 (rpsD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S4
S4
SYY_C-terminal
MTTB
HamA
Motif
Other DBs
NCBI-ProteinID:
ALN87187
LinkDB
All DBs
Position
complement(4378039..4378668)
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AA seq
209 aa
AA seq
DB search
MARYIGPTCKLARREGADLGLKSSARALDSKCKLEQKPGQHGPTARKGKLSDYATQLREK
QKVKRIYGLLERQFRNYYKKASTKKGNTGENLLQLLETRLDNVVYRMGFAVTRPAARQLV
SHRGVTVNGKSVNLPSYQVKAGDAIALSERAQKQLRVQESLTVSSQMDLSPSWVEVDSKK
FSGVFKAVPDRADLPADINEALIVELYSK
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggctcgttatattggccccacctgtaagctcgcccgtcgcgaaggcgccgatctcggt
ctgaagtcgtccgctcgcgcgctcgactcgaagtgcaaactggagcagaagcccggtcag
cacggccccaccgcccgcaagggcaagctgtccgactacgccacccagcttcgtgagaag
cagaaggtcaagcgtatctacggtctgctggagcgtcagttccgcaactactacaagaag
gcctcgaccaagaagggcaacaccggcgagaacctgctgcagttgctggaaacccgtctg
gacaacgtcgtctaccgcatgggcttcgccgtgactcgtccggctgcccgtcagctggtc
tcgcaccgcggcgtcaccgtcaacggcaagtcggtcaaccttccgtcgtaccaggtcaag
gccggcgacgcgatcgcgttgtccgagcgcgcccagaagcagcttcgcgtgcaggaatcc
ctgaccgtgtcgtcgcagatggacctgtcgccgtcgtgggtcgaagtggacagcaagaag
ttcagcggcgtgttcaaggcggttccggatcgtgcggacctgccggccgacatcaacgaa
gcgctgatcgtcgagttgtacagcaagtaa
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