KEGG   Lysobacter capsici: LC55x_4152
Entry
LC55x_4152        CDS       T04162                                 
Name
(GenBank) DEAD/DEAH box helicase family protein
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
lcp  Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:lcp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lcp03400]
    LC55x_4152
Enzymes [BR:lcp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     LC55x_4152
DNA repair and recombination proteins [BR:lcp03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    LC55x_4152
SSDB
Motif
Pfam: Helicase_C_2 DEAD ResIII DEAD_2
Other DBs
NCBI-ProteinID: ALN87403
LinkDB
Position
complement(4595418..4597553)
AA seq 711 aa
MPQPSRLGVATRAALSEGGDLARNIAAFAPRPAQQDLSVAIADAFEARSTLLAEAGTGTG
KTFAYLVPALLSGLKTIVSTGTRALQDQLYHRDLPRVRDALGVGLKTALLKGRANYLCKY
RTEQAKGEPRFTSRDYAAQFQRIVSWSGRTRMGDLAELDGLPEDSPLLPMVTSTAENCLG
SECPMFGDCFVVQARQRAQAADLVVVNHHLLLADLALKQEGFGEILPGAQAFVVDEAHQL
PDLASQFFGEAISARPLVELARDALAECKSVSGSLASVQTPSRDLEQAVRGLRAAMDELP
VRATRRRAAEVLAVEAAFDTLDAALGAMHKTLEPLRGAAPGFDSCHARAKDFQTKLRRWR
GGPPPVAAVVEPIEEDDDFALPRGGVAVEAIAEPVELLADEPAEDEAEQTPAAPDTSVLW
YELTARGFRLARTPLDVAAPLAEHRERSRAAWIFTSATLAVGGRFEHYATKLGLVEPTTL
LAPSPFDWAEQALLYLPRGLPDPAVRHYNESMVDRLRPVLEASGGRAFVLFASHRALREA
AELLRDGPWPLFVQGEAPRHVLLERFRASGNGVLLGAASFREGVDVAGEALSVVVIDKLP
FAAPDDPVFEARLDAIRRGGGNPFRDEQLPQAVIALKQGAGRLIRSETDRGVLVLCDPRL
LSKSYGKTFLDSLPPLPRTRQVEDVGRFFAGEPLVLESATSASSDDDYYYQ
NT seq 2136 nt   +upstreamnt  +downstreamnt
atgccacaacccagccgcctcggcgtcgccacccgtgccgcgctgagcgaaggcggcgat
ctcgcgcgcaacatcgccgcgttcgcgccgcgacccgcgcaacaggacctgtcggtggcg
atcgccgacgcgttcgaagcgcgttcgaccctgctcgccgaagccggcaccggcaccggc
aagaccttcgcctatctagtgccggcgttgttgtcgggattgaagaccatcgtctccacc
ggcacccgcgcgctgcaggatcagctgtatcaccgcgacttgccgcgggtgcgcgacgcg
ctcggcgtcggcctgaagaccgcgttgctgaagggccgcgccaattatctgtgcaagtac
cgcaccgagcaggccaagggcgagccgcgtttcaccagtcgcgattacgccgcgcagttc
cagcgcatcgtcagctggtccgggcgcacccgcatgggcgacctggccgaactcgacggt
ttgccggaagactcgccgctgctgccgatggtcacctcgaccgcggaaaactgcctgggc
agcgagtgcccgatgttcggcgactgcttcgtggtgcaggcgcggcagcgcgcccaggcc
gccgacctggtggtggtcaatcatcatctgctgctggccgatctggccttgaagcaggaa
ggtttcggcgaaatcctgccaggcgcgcaggcgttcgtggtcgacgaagcgcatcagctg
ccggacctggcttcgcaattcttcggcgaggcgatcagcgcgcggccgctggtcgaactg
gcgcgcgacgcgttggccgaatgcaagagcgtgagcggttcgctggccagcgtgcagacg
ccgtcgcgcgatctcgaacaggcggtgcgcggcctgcgcgcggcgatggacgaactgccg
gtgcgcgcgacccgtcgccgcgccgccgaggtgctggcggtcgaggccgcgttcgatacg
ctcgatgccgcattgggcgcgatgcacaagacgctcgaaccgctgcgcggcgccgcgccg
ggcttcgacagctgccacgcgcgcgccaaggatttccagaccaagctgcggcgctggcgc
ggcggtccgccgccggtcgcggccgtggtcgagccgatcgaagaggacgacgatttcgcg
ctgccgcgggggggcgtcgcggtcgaggccatcgccgaacccgtcgagctgcttgccgac
gaaccggccgaagacgaagccgaacaaaccccggccgcgcccgataccagcgtgctgtgg
tacgaactcaccgcgcgcgggttccgtctggcgcgcacgccgctggatgtcgccgcgccc
ctggccgagcaccgcgaacgttcgcgcgcggcctggatcttcacctcggccacgctcgcg
gtcggcggccgtttcgagcattacgcgaccaagctcggcctggtcgaacccacgaccctg
ctcgcgcccagcccgttcgattgggccgaacaggcgctgttgtacctgccgcgcggcctg
cccgatccggcggtgcgtcactacaacgagagcatggtcgatcgcctgcgcccggtgctc
gaagcctccggcggccgcgccttcgtcctgttcgcctcgcaccgcgccttgcgcgaagcg
gccgaattgctgcgcgacgggccttggccgctgttcgtgcagggcgaagcgccgcggcac
gtgctgctcgaacgcttccgcgcctcgggcaacggcgtgctgctgggcgcggcgagtttc
cgcgaaggcgtggatgtagccggcgaagcgctgagcgtggtggtgatcgacaaactgccg
ttcgccgcgcccgacgacccggtgttcgaagcgcgcctggacgccatccgccgcggcggc
ggcaacccgttccgcgacgaacaactgccgcaggcggtgatcgcgctcaagcagggcgcc
ggccgcctgatccgcagcgagaccgatcgcggcgtgctggtcctgtgcgacccgcgcctg
ctgtccaagagctacggcaagaccttcctcgactcgctgccgccgctgccgcgcacccgc
caggtcgaggacgtgggccggttcttcgccggcgagccgctggtactagaatcggccacg
tcggcgtcgtccgacgacgactattactaccagtga

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