Lysobacter capsici: LC55x_4155
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Entry
LC55x_4155 CDS
T04162
Name
(GenBank) glycosyl transferase 2 family protein
KO
K12990
rhamnosyltransferase [EC:2.4.1.-]
Organism
lcp
Lysobacter capsici
Pathway
lcp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LC55x_4155
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
lcp01005
]
LC55x_4155
Lipopolysaccharide biosynthesis proteins [BR:
lcp01005
]
O-antigen repeat unit
LC55x_4155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
Glyco_tranf_2_3
Glyco_trans_2_3
Aconitase_C
Motif
Other DBs
NCBI-ProteinID:
ALN87406
LinkDB
All DBs
Position
complement(4600931..4601866)
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AA seq
311 aa
AA seq
DB search
MQALAPAQAADVCAAIVTYHPQIELLDQVVAAIKPQVGRVLIFDNASPGEALDAYFERLR
GQGVEVIRGDRNVGLGSAINHAARAARAAGFAQLLLMDQDSIVDADMVAVLQSHLHRLQA
QHPVAAVGPQFRDQRTGAIAPFVQIGFPLNRKFYGGPGQVIDCDFLITSGTLLPLEVLDT
VGGMDEGLFIDNVDVEWSSRAKHRGYRLYGICDAGMQHRIGELEPVSRLIPYRTVVHSPT
RLYYMMRNRIALYRRVEVPRRWAAQDLPRLVLKFVGTVVLLKPRGAYLKAMLRGLRDGLR
GRDGPMPPAED
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccctagcgccggcccaggccgcggacgtatgcgccgcgatcgtcacctaccac
ccgcagatcgaactgctcgaccaggtcgtcgccgcgatcaagccgcaggtcgggcgcgtg
ctgatcttcgacaacgccagtcccggcgaggcgctcgacgcgtatttcgagcggctgcgc
gggcagggcgtggaggtgatccgcggcgaccgcaacgtcggtctgggcagcgcgattaac
cacgccgcgcgggccgcgcgcgcggccggtttcgcgcaactgctgttgatggaccaggac
agcatcgtcgatgcggacatggtcgcggtgttgcaaagccatctgcaccgcttgcaggcg
cagcacccggtcgccgcggtcgggccgcagtttcgcgaccagcgcaccggcgcgatcgcg
ccgttcgtgcagatcgggtttccgctcaaccgcaagttttacggcggcccgggccaggtg
atcgactgcgatttcctgatcacctcgggcaccttgttgccgctggaggtgctggacacg
gtcggcggcatggacgaaggcttgttcatcgacaacgtcgacgtcgaatggagttcgcgc
gccaagcaccgcggctatcgcctgtacggcatctgcgacgccggcatgcagcaccggatc
ggcgagctggaaccggtgtcgcggctgattccctaccgcaccgtagtccacagcccgacc
cggctgtactacatgatgcgcaaccgcatcgccttgtaccgccgggtcgaagtgccgcgg
cgctgggccgcgcaggacctgccgcggctggtgttgaagttcgtcggtactgtcgtgctg
ctcaagccgcggggtgcttatttgaaggcgatgctgcgcggcctgcgcgatggcctgcgc
ggacgcgatgggccgatgccgccggcagaggattag
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