Lysobacter capsici: LC55x_4214
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Entry
LC55x_4214 CDS
T04162
Name
(GenBank) ABC transporter family protein
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
lcp03012
]
LC55x_4214
Translation factors [BR:
lcp03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
LC55x_4214
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
ABC_tran_CTD
RsgA_GTPase
AAA_29
MMR_HSR1
AAA
AAA_23
AAA_22
AAA_24
NACHT
AAA_25
AAA_28
AAA_16
AAA_33
TsaE
Lebercilin
DUF7610
Motif
Other DBs
NCBI-ProteinID:
ALN87464
LinkDB
All DBs
Position
complement(4673456..4675330)
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AA seq
624 aa
AA seq
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MISFRDFAMRRGERLLLSNVDLTLHAGWRVGVIGRNGTGKSSLFAAIQGEVEADRGDIDV
PNRVRIASVAQETPALDDPALDFVLSGDATVYKVLVAEREAVEREDWEAVAEAHHQLEEL
GGYDATARAGKLLHGLGFSPDTHERAVKEFSGGWRVRLNLARALMTPSDLLLLDEPTNHL
DLDAVLWLEQWLLKYPGTLLLISHDREFLDEVTTHTLHLHDGKAKLYTGDYTAFERQRAE
HLRLQQITHEKQQAERAHLQSFIDRFSASAAKAKQAQSRVKRLAKMVGTEAVRMERAMRI
EFPAPVKLPHALLRLVHADCGYGDHVVLDDVSFILEAGDRIALLGPNGAGKSTLVKSLVG
ELELLTGERGGHPDLRIGYFAQHTVESLHAGVSPIDHLAEIAPGVPTQQLRDFLGKWNFP
GDRAFESVDGFSGGERARLALAMIAWRKPNVLLLDEPTNHLDLDVREALAEALSDFAGAI
VLVSHDRHLIGLVCETFWRVADGVAQPFDGDLDAYAVWLRTRDNSNDGKGAAASKAAAAA
AAAASAAAPAAKSSRKANPLKLAEAEKRMAELESKLHTLDMDLADPTKYAGGGDNAAELA
KQREKIAAELAKAEAEWMALYDAA
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgatttctttccgtgatttcgccatgcggcgcggcgaacgcctgctgctgtccaacgta
gacctgaccctgcacgccggttggcgggtgggcgtgatcggtcgtaacggcactggtaag
tcgtcgctgttcgccgccatccagggcgaggtcgaggccgatcgcggcgatatcgacgtg
cctaaccgcgtgcgcatcgccagcgtggcccaggaaaccccggccctggacgacccggcg
ctggacttcgtcctgtccggcgacgccaccgtctacaaggtcctggtggccgagcgcgaa
gcggtcgagcgcgaggactgggaagcggtcgccgaggcccaccatcagctcgaagagctt
ggcggctacgacgccaccgcgcgcgccggcaagctgctgcacggcctgggcttctcgccc
gacacccacgaacgcgcagtcaaggaattctccggcggctggcgggtgcgcctgaacctg
gcgcgcgcgctgatgacgccgtcggacctgctgctgctcgacgaaccgaccaaccacctc
gacctcgacgcggtgctgtggctggagcaatggctgctcaaatacccgggcaccttgctg
ctgatctcgcacgaccgcgagttcctcgacgaagtcaccacccacaccctgcatctgcac
gacggcaaggccaagctgtacaccggcgattacaccgcgttcgagcgccaacgcgccgaa
cacctgcgcctgcagcagatcacccacgaaaagcagcaggccgaacgcgcccatctgcag
agcttcatcgaccgcttcagcgccagcgcggccaaggccaagcaggcgcagtcgcgggtc
aagcgcttggccaagatggtcggcaccgaggcggtgcgcatggaacgcgcgatgcggatc
gagttcccggccccggtcaagctgccgcacgcgctgctgcgcctggtccatgccgattgc
ggttacggcgaccacgtcgtgctcgacgatgtcagcttcatcctcgaagccggcgatcgc
atcgccctgctcgggccgaacggcgcgggtaaatcgaccctggtcaaatcgctggtcggc
gagctggaactgctgaccggcgaacgcggcggtcacccggacctgcgcatcggctacttc
gcccagcacacggtcgaatcgctgcacgcgggcgtgagcccgatcgaccacctggccgag
atcgcgccgggcgtgccgacccagcagttgcgcgatttcctcggcaaatggaatttcccc
ggcgaccgcgccttcgaatcggtcgatgggttctccggcggcgagcgcgcgcgcctggcc
ctggcgatgatcgcctggcgcaagccgaacgtgctgctgctcgacgaaccgaccaaccat
ctggacctggacgtgcgcgaagcgctcgccgaggccttgtcggatttcgccggcgcgatc
gtgctggtctcgcacgaccgccacctcatcggcctggtctgcgaaaccttctggcgcgtg
gccgacggcgtggcccagccgttcgacggcgacctcgacgcctacgcggtgtggctgcgc
acgcgcgacaacagcaacgacggcaaaggcgcggccgcgtccaaggccgccgcagcggct
gcggccgccgcgagcgcggcggcgccggcggcgaaatcctcgcgcaaggccaacccgctg
aaactcgccgaagccgagaagcgcatggccgagctggaatcgaaactgcacacgctcgac
atggacctcgccgacccgaccaagtacgccggcggcggcgacaacgccgcggaacttgcg
aagcagcgcgagaaaatcgccgccgaactggccaaggccgaggcggagtggatggcgttg
tacgacgcggcttga
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