Lysobacter capsici: LC55x_4228
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Entry
LC55x_4228 CDS
T04162
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
lcp
Lysobacter capsici
Pathway
lcp00860
Porphyrin metabolism
lcp01100
Metabolic pathways
lcp01240
Biosynthesis of cofactors
Module
lcp_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
LC55x_4228 (cobD)
Enzymes [BR:
lcp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
LC55x_4228 (cobD)
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GFIT
Motif
Pfam:
CobD_Cbib
AmpE
Alpha_GJ
Motif
Other DBs
NCBI-ProteinID:
ALN87478
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All DBs
Position
complement(4688836..4689510)
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AA seq
224 aa
AA seq
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MYLAIGLRSLDEHAAPVAAALQAGDLAGARAAVGRIVSRDVDALDGERVAAAATESVLEN
GSDAVFAALFWFAVLGPAGAVLYRLANTLDAMWGYRTPRYERFGWAAARIDDALNLIPAR
LTALTYAALGDTASAWRCWRTQARHWDSPNAGPVMAAGAGALRVRLGGSAPYHGVWEPRP
LLGEGDAPSADSIRRALGLVKRGVAVWVGLFVLAAWTGWAYARV
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
ttgtatctggcgatcggcctgcgcagcctggacgaacacgccgcgccggtggcggcggcg
ttgcaggccggcgatctggccggcgcgcgcgcggcggtcggacgcatcgtcagccgcgac
gtcgatgcgctcgacggcgaacgggtcgccgcggcggcgaccgaatcggtgctggaaaac
ggcagcgacgcggtgttcgccgcgttgttctggttcgccgtgctcggcccggccggcgcg
gtcctgtaccggctcgccaacaccctggacgcgatgtggggctatcgcacgccgcgctat
gaacgcttcggctgggcggcggcgcggatcgacgatgcgctcaacctgattcccgcgcgt
ctgaccgcgctgacctatgccgcgctcggcgacaccgcgagcgcgtggcgttgctggcgc
actcaggcgcggcactgggacagcccgaacgcggggccggtgatggcggccggcgcgggt
gcgctgcgggtccggctgggcggctcggcgccgtatcacggggtgtgggaaccgcggcca
ctgctgggcgaaggcgatgcgccgagcgccgattcgattcgtcgcgcgttgggtttggtg
aagcgcggcgtggcggtctgggtggggctgttcgtgctggcggcgtggacgggatgggcg
tatgcgcgggtctga
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