Lysobacter capsici: LC55x_4229
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Entry
LC55x_4229 CDS
T04162
Name
(GenBank) cobQ/CobB/MinD/ParA nucleotide binding domain protein
KO
K02224
cobyrinic acid a,c-diamide synthase [EC:
6.3.5.9
6.3.5.11
]
Organism
lcp
Lysobacter capsici
Pathway
lcp00860
Porphyrin metabolism
lcp01100
Metabolic pathways
lcp01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
LC55x_4229
Enzymes [BR:
lcp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.9 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing)
LC55x_4229
6.3.5.11 cobyrinate a,c-diamide synthase
LC55x_4229
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Gene cluster
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Motif
Pfam:
GATase_3
CbiA
AAA_26
DJ-1_PfpI
Motif
Other DBs
NCBI-ProteinID:
ALN87479
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Position
complement(4689771..4691129)
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AA seq
452 aa
AA seq
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MEKALGVDASAVANPESPISNPAGSASCPTLLVSAPASGQGKTSVTAAIARWHARQGRRV
RVFKTGPDFLDPMVLERASGHVVQQLDLWMCGEADVRARLHAAAREADLILIEGVMGLFD
GNPSSADLAQALGVPVLAVIDGSAMAQTFGALATGLARYREGLTVYGVAANRIGSAYHAQ
LLRESLPADLRWLGALPRDPALALPERHLGLVAAGELGDIDARLDALADAWVTHADAELP
PPVEFAASEPVRVPPLLQARRIAIARDAAFCFVYPANLQLLIEAGAECIAFSPIAGDSLP
DCDAVWLPGGYPELHLPALSANAALRDALRAHRDAGKPILAECGGLLYALDSLSDREGNS
GAMAGLLRGHARIQPRMAALGLQSVELPEGVLRGHTFHYAQAQIEAAAIAQSTNPNGGPS
REALYRDRRLSASFVHFYFPSNPQAAARLFLP
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaagcgttgggagtcgacgcgtctgctgttgcgaatcccgaatccccaatctcg
aatcccgcgggcagcgccagctgcccgaccctgctcgtgtccgctcccgcgtccggccag
ggcaagaccagcgttaccgccgcgatcgcgcgctggcatgcgcggcaggggcgacgggtg
cgggtgttcaagaccgggccggactttctcgatccgatggtgctcgaacgcgccagcggt
cacgtcgtgcagcagctcgatctgtggatgtgcggcgaagccgatgtgcgcgcgcgtctg
catgcggcggcgcgcgaggccgatctgattctgatcgaaggggtgatgggcttgttcgac
ggcaatccgtcgagcgcagatctggcccaggcgctgggcgtgccggtgctcgcggtcatc
gacgggtcggcgatggcgcagactttcggcgcgctcgccaccggtctggcgcgctatcgc
gaaggcttgacggtctacggcgtcgccgccaatcgcatcggcagcgcgtatcacgcgcag
ttgctgcgcgagagtctgccggcggatttgcgctggctcggcgcgttgccgcgcgatccg
gcgctggccttgcccgagcgccatctgggcttggtcgcggcgggcgagttgggcgatatc
gatgcgcgcctggatgcgctcgccgatgcctgggtcacgcatgccgacgccgaattgccg
ccgccggtcgaattcgccgcgagcgagcccgtgcgcgtgccgccgctgctgcaagctcgg
cgcatcgcgatcgcacgcgacgccgccttctgttttgtttatccggcgaatctgcaattg
ctgatcgaagcgggcgccgagtgcatcgcgttttcgccgatcgccggcgacagcctgccc
gactgcgatgcggtctggttgcccggcggttatcccgaactgcatctgccggcgttgtcg
gccaatgcggccttgcgcgacgcgctgcgcgcgcatcgcgacgcgggcaagccgatcctc
gccgaatgcggcggcctgttgtacgcgctcgattcgttgagcgaccgcgaaggaaattcc
ggcgcgatggcggggctgttgcgcggccatgcgcggatccagccgcgcatggccgcgctg
ggcctgcaatcggtggaactgcccgagggcgtgctgcgcgggcataccttccattacgcc
caggcgcagatcgaggccgcggcgatcgcgcaatcgaccaacccaaacggcgggccgagc
cgcgaagcgctgtatcgcgaccggcgcctgagcgcgagcttcgtccacttctactttccg
tcgaacccgcaggccgccgcacgcttgtttctgccatga
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