Lysobacter capsici: LC55x_4233
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Entry
LC55x_4233 CDS
T04162
Symbol
btuB
Name
(GenBank) tonB-dependent vitamin B12 receptor
KO
K16092
vitamin B12 transporter
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcp02000
]
LC55x_4233 (btuB)
Transporters [BR:
lcp02000
]
Other transporters
Pores ion channels [TC:
1
]
LC55x_4233 (btuB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
ALN87483
LinkDB
All DBs
Position
complement(4693122..4694963)
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AA seq
613 aa
AA seq
DB search
MSLTLSACALPASAAPAAVDLDQVVVTATRTAQTQDATLAAVTVIDRDEIERRQPSSLPD
LLRGTPGVSLANNGGAGKSTSLFLRGTESDHVLVLIDGIKIGSATSGGASLQDIPVEQIE
RIEIVRGPFSSLYGSEAIGGVIQIFTRRPQGPFAPSFGVSIGSNATRRASAGVAGKGERG
WYSINAAHEDTDGINACRGKPSPGGAGCFTNSPDRDGYRNSSLTMQGGYRFNDQWDGEAR
VFRAEGNNHYDGSQNNEADNVQQVAGVKLRYKPSERVTLSANAGHSADLSDTYKNGKYSS
TFDTRRQLGSVQGDFGVGAGLLSMGFDWQRDEIESNTAYARDHRILRGAFAQWQRSFGAH
AVQASLRRDDDSQFGGETTGSALWGWDLSDSLRLTASYGTAFKAPTFNELYYPGYGNPRV
QPETSRSLEVGLRGTHGAQRQHVWSLNAFQTRVDDLIAYDASIGAPGNVDRARIRGLEAV
LDTRLAQWDLRASATWLDPRNDSPNAYRDNYLQRRARQSARVDADRRFQLGGASSWSLGA
SVYAAGERYDDLANTRRLGGYALTDLRLGYAIDAAWSLQLSANNVFDRRYETAAFYNQPG
RNYLLSLRYRPSR
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
ttgagcctgaccctgagcgcctgcgcgctgcccgcgtccgccgcgccggccgcggtcgac
ctggatcaagtggtggtgaccgccacccgcaccgcgcagacccaggacgcgaccctggcg
gcggtgaccgtaatcgatcgcgatgagatcgaacggcgccagccgtcctcgctgccggat
ctgttgcgcggcaccccgggcgtttccctggccaacaacggcggcgccggcaaatcgact
tcgttgttcctgcgcggcaccgaatcggaccacgtgctggtgctgatcgacggcatcaag
atcggttcggcgaccagcggcggcgcctcgctgcaggacattccggtcgaacagatcgaa
cgcatcgaaatcgtgcgcgggccgttctccagcctgtacggctccgaggcgatcggcggg
gtgatccagatcttcacccgccgcccgcaaggaccgttcgcgccgagtttcggcgtgtcg
atcggcagcaacgccacccgtcgcgcgagcgccggcgtggccggcaagggcgagcgcggc
tggtactcgatcaacgccgcgcacgaagacaccgacggcatcaacgcctgccgcggcaag
ccctcgccgggcggcgcgggctgcttcaccaactcgcccgaccgcgacgggtatcgcaac
agctcgctgaccatgcagggcggctatcgcttcaacgaccagtgggacggcgaagcgcgg
gtgttccgcgccgaaggcaacaaccattacgacggcagccagaacaacgaggccgacaac
gtccagcaagtggccggcgtcaagttgcgctacaagccgagcgaacgggtgaccctgagc
gccaacgctgggcacagcgccgatttgagcgatacctacaagaacggcaagtattccagc
accttcgatacgcgccgccagttgggctcggtgcagggcgatttcggagtcggcgcgggc
ttgttgagcatgggcttcgattggcagcgcgacgaaatcgaaagcaacacggcttacgcg
cgcgaccaccgcatcctgcgcggcgcgttcgcgcaatggcagcgcagcttcggcgcgcac
gcggtgcaggccagcctgcgccgcgacgacgacagccagttcggcggcgaaaccaccggc
agcgcgctgtggggctgggacctgagcgactcgctgcggttgaccgcgagctacggcacc
gcgttcaaggcgccgaccttcaacgagctgtattaccccggctacggcaacccgcgggtg
caaccggaaacctcgcgcagcctcgaagtcggcctgcgcggcacccacggcgcgcagcgc
cagcacgtgtggtcgctcaacgcgttccagacccgggtcgacgacctgatcgcctacgac
gcctcgatcggcgcgccgggcaatgtcgaccgcgcccgcatccgcggcctggaagcggtg
ctcgacacccgtctggcgcagtgggacctgcgcgccagcgcgacctggctggacccgcgc
aacgacagccccaacgcctatcgcgacaactatctgcagcgacgcgcgcggcagagcgcg
cgggtcgacgccgatcgccgtttccaactcggcggggcctcgtcctggtcgctgggcgcc
agcgtctacgccgccggcgagcgctacgacgacttggccaatacccgccgcctgggcggc
tacgcgctgaccgatctgcgtctgggctacgccatcgacgcggcctggagcctgcaactg
tcggccaacaacgtgttcgatcgccgttacgaaaccgccgccttctacaatcaacccggt
cgcaactatctgttgagtctgcgttaccgaccctcccgctga
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