Lysobacter capsici: LC55x_4241
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Entry
LC55x_4241 CDS
T04162
Name
(GenBank) ompA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcp02000
]
LC55x_4241
Transporters [BR:
lcp02000
]
Other transporters
Pores ion channels [TC:
1
]
LC55x_4241
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
YidB
DUF748
CcmH
Motif
Other DBs
NCBI-ProteinID:
ALN87491
LinkDB
All DBs
Position
4704793..4706139
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AA seq
448 aa
AA seq
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MFNSLIRDAAERFNLGDKAERFIGLLLGLIFDPAQGGFSGLRSRFTQVGLGDLFRSWIGA
HVVDNVLQPDQFSAAIGDEALASMAAKLGVPKVSISLAGATLLPKLIGLLTRDGEPSAAP
AEALALINGAPVPRAQHVAPTSARKAESRPGWLLWLVPLLLLLGGFLLMRSCGKDEAVAP
EPTPAATAPSEPAAPVAPVAQANARFDLSNVDGKVTVNGQVASDADKLKLWDALKAAFGE
TNLSGDIRVDPATLPAGWMDKLIGLLPQLKAKGLKFGFDGDTLSIDTSALPEDQRIAVSE
QLRKAFGGFQISGLWDRAAAALSGLKAGFSGDDLVGALNLMNVYFDSGSATITRDSLETL
DHAAKAIKAAPTGIRIEVGGHTDNTGDAAANLTLSQQRADAVIARLAELGVARETLVGKG
YGQDQPIADNASEEGKAKNRRMHFTVLK
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgttcaactcactcatccgcgacgccgcggagcgattcaacctgggcgataaggccgaa
cgctttatcggcctgttgctgggtttgatcttcgatccggcccagggcggattttccggc
ctgcgttcgcgtttcacccaggtcggcctgggcgatctgtttcgctcctggatcggcgcg
catgtggtcgacaacgtgctgcaacccgaccagttcagcgccgcgatcggcgacgaggcc
ctggcctcgatggccgccaagctcggcgtgcccaaggtctcgatcagcctggccggcgcc
accttgctgcccaagctgatcggcctgttgacccgcgacggcgagccgtcggcggcgccc
gccgaggccctggcgctgatcaacggcgcgccggtcccgcgcgcgcagcacgtcgcgccg
accagcgcgcgcaaagccgagagccgcccaggctggctgctgtggctggttccgctgctg
ctgttgctcggcgggttcttgctgatgcgcagttgcggcaaggacgaggccgtcgcaccg
gaaccgacacccgcggcgaccgcgcctagcgaaccggcggcgccggtcgcaccggtcgcg
caagccaacgcgcgcttcgacctgagcaacgtcgacggcaaggtcacggtcaacggccag
gtcgccagcgacgccgacaagctcaagctgtgggacgcgctcaaggccgcgttcggcgaa
accaatctcagcggcgacatccgcgtcgatcccgcgacgctgccggccggctggatggac
aagctgatcggcttgctgccgcagctcaaggccaagggcctgaagttcggtttcgacggc
gacacgctcagcatcgacacctccgccctgcccgaggatcagcgcatcgcggtcagcgag
cagctgcgcaaggcgttcggcggcttccagatcagcggcctgtgggatcgcgccgccgcc
gcgctgagcgggttgaaggccggtttcagcggcgacgacctggtcggggcgctcaacctg
atgaacgtctacttcgacagcggctcggccaccatcacccgcgacagtctggagaccctc
gaccacgcggccaaggcgatcaaggccgcgccgaccggcatccgcatcgaggtcggcggc
cacaccgacaacaccggcgacgccgcggccaacctcaccttgagccagcaacgcgccgat
gcggtgatcgccaggctcgccgaactcggcgttgcccgcgagaccctggtcggcaagggc
tacggccaggatcagcctatcgccgacaacgccagcgaggagggcaaggccaagaatcgg
cgcatgcatttcactgtgttgaaatga
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