Lysobacter capsici: LC55x_4252
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Entry
LC55x_4252 CDS
T04162
Symbol
sucD
Name
(GenBank) succinyl-CoA synthetase, alpha subunit
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
lcp
Lysobacter capsici
Pathway
lcp00020
Citrate cycle (TCA cycle)
lcp00640
Propanoate metabolism
lcp00660
C5-Branched dibasic acid metabolism
lcp00720
Other carbon fixation pathways
lcp01100
Metabolic pathways
lcp01110
Biosynthesis of secondary metabolites
lcp01120
Microbial metabolism in diverse environments
lcp01200
Carbon metabolism
Module
lcp_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lcp_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LC55x_4252 (sucD)
00640 Propanoate metabolism
LC55x_4252 (sucD)
00660 C5-Branched dibasic acid metabolism
LC55x_4252 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
LC55x_4252 (sucD)
Enzymes [BR:
lcp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
LC55x_4252 (sucD)
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Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
KARI_N
GFO_IDH_MocA
Motif
Other DBs
NCBI-ProteinID:
ALN87502
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All DBs
Position
complement(4716014..4716889)
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AA seq
291 aa
AA seq
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MSVLINKNTKVIVQGFTGSQGSFHAEQMLDYGTKVVGGVTPGKGGTQHLGLPVFNTVRDA
VEETGADASVIYVPPPFAADAILEAADAGIKVIVCITEGIPVLDMLRVKNTLNGYEDVVL
VGPNCPGVITPGECKIGIMPGHIHMPGKIGIVSRSGTLTYEAVKQTTDVGLGQSTCIGIG
GDPINGTNFIDALKWFQDDPQTEGIIMVGEIGGSAEEEAAEFISQYVTKPVVGFIAGASA
PKGKRMGHAGAIASGGQGTAEGKFAAMEKAGVTTVKSPGDLGAAIAKRLAK
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtattgatcaataagaacaccaaagtcatcgtccagggcttcaccggctcgcag
ggctccttccacgccgaacagatgctcgactacggcaccaaggtcgtcggcggcgtgact
ccgggcaagggcggcacccagcacctcggcctgccggtgttcaacaccgtgcgcgacgcg
gtcgaggaaaccggcgccgacgcgtcggtgatctacgtgccgccgccgttcgcggccgac
gcgatcctggaagcggccgacgccggcatcaaggtcatcgtgtgcatcaccgaaggcatc
ccggtgctcgacatgctgcgggtgaagaacaccctcaacggctacgaggacgtggtcctg
gtcggtccgaactgccccggcgtgatcaccccgggcgagtgcaagatcggcatcatgccg
ggccacatccacatgccgggcaagatcggcatcgtctcgcgctcgggcacgctgacctat
gaagcggtcaagcagaccaccgacgtgggcctgggccagtcgacctgcatcggcatcggc
ggcgacccgatcaacggcaccaacttcatcgacgcgctgaagtggttccaggacgatccg
cagaccgaaggcatcatcatggtcggcgaaatcggcggttcggccgaggaagaagcggcc
gagttcatcagccagtacgtcaccaagccggtggtcggcttcattgccggcgcctcggcg
ccgaagggcaagcgcatgggtcacgccggcgcgatcgcctcgggcggccagggcacggcc
gagggcaagttcgcggcgatggagaaggccggcgtcaccacggtgaagtcgccgggcgac
ctgggcgcggcgattgccaagcggttggcgaagtaa
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