Lysobacter capsici: LC55x_4379
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Entry
LC55x_4379 CDS
T04162
Symbol
gmd
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
lcp
Lysobacter capsici
Pathway
lcp00051
Fructose and mannose metabolism
lcp00541
Biosynthesis of various nucleotide sugars
lcp01100
Metabolic pathways
lcp01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
LC55x_4379 (gmd)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LC55x_4379 (gmd)
Enzymes [BR:
lcp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
LC55x_4379 (gmd)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
NmrA
NAD_binding_10
adh_short
Motif
Other DBs
NCBI-ProteinID:
ALN87629
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Position
complement(4857151..4858125)
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AA seq
324 aa
AA seq
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MSNKNALITGITGQDGAYLSQLLLSKGYAVYGILARRSSDTLWRLRELGVADQVTLLDGD
LTDLSSLIRAMDVSKADEVYNLGAQSFVGSSWQQPLLTAQVDGVGALNVLEAVRIVNPKA
RFYQASTSEMFGLIQAEMQDETTPFYPRSPYGVAKLMAHWATVNYRESFGLHASSGILFN
HESPLRGIEFVTRKVTDAVARIKLGQQKELRLGNIDSKRDWGFAGDYVEAMWLMTQQAEG
GDYVVATGETTTVRKMCEIAFEHVGLNVNDHLIIDEKFFRPAEVDVLLGNPAKAKAKLGW
SPKTSLQKLIEMMVEADLRRLTTR
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaagaacgcattgatcactggtatcaccggccaggacggcgcttacctttcg
caattgttgttgtcgaaaggctacgcggtatacggcatcctcgctcggcgcagcagcgat
accctctggcgcttgcgcgagttgggagtcgccgatcaggtgacgttgctggatggcgac
ttgactgatttgtcgtcgttgattcgcgcgatggacgtctccaaggccgacgaggtgtac
aacctcggcgcccagagtttcgtcggatcgtcctggcagcaaccgctgctgaccgcgcaa
gtcgatggcgtcggcgcgctgaacgtgctcgaagcggtgcgtatcgtcaatccgaaggcg
cgtttctatcaggcgtcgaccagcgaaatgttcggtctgatccaggccgagatgcaggac
gagaccacgcccttctatccgcgcagtccttacggcgtggccaagctgatggcccactgg
gcgacggtgaactaccgcgaaagcttcggcctgcatgcttccagcggcatcttgttcaac
cacgagtcgccgctgcgcggcatcgagttcgtgacccgcaaggtcaccgacgcggtcgcg
cggatcaagctgggtcagcaaaaagagctgcgcctgggcaacatcgactccaagcgcgac
tggggtttcgccggcgactacgtcgaggcgatgtggctgatgacccagcaggccgagggc
ggcgactacgtcgtggcgaccggcgagaccacgaccgtgcgcaagatgtgcgaaatcgct
tttgaacacgtgggtttgaacgtcaacgaccatttgatcatcgacgagaagttcttccgt
ccagccgaagtcgacgtattgctcggcaacccggccaaggccaaggccaagctcggttgg
tcgccgaagaccagcttgcaaaagctgatcgaaatgatggtcgaagcggacttgcgtcgc
ttgacgacgcgttga
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