Lysobacter capsici: LC55x_4443
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Entry
LC55x_4443 CDS
T04162
Name
(GenBank) endonuclease/Exonuclease/phosphatase family protein
KO
K07004
uncharacterized protein
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
LC55x_4443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LTD
PPC
Calx-beta
DUF11
Exo_endo_phos_3
Exo_endo_phos
LapA
Motif
Other DBs
NCBI-ProteinID:
ALN87692
LinkDB
All DBs
Position
4928666..4932157
Genome browser
AA seq
1163 aa
AA seq
DB search
MDKRTSRLLAAAVLTLAAAGSAQAQVVISQVYGGGGNNGARYKSDFIELHNNGASAVDLS
GWSVQYNSSAGTGAWQRTTLTGSIAPGGYYLVKQADGTGGTDVLPTPDVVGTIAMSGTSG
KVALVNNATALSGACPAGRIDTVGFGGAATCSEGTPTANTANATGAVRKNNGCTDTDNNS
ADFDIVEPTPRNSAAPAFACAGGNQPVLSVADVSLDEGNSGTVSFVFNLSLSQPAGVGGV
AWSASTVDGTATAGSDYVALAGATGTIAEGQSSGTVTVTVNGDAVQEPNETFQLRVQVTS
GGLPAPPAFAQATATIANDDVTLVPIHDIQGNGATSPLTGQTVTFQGVVTGRKSNGFFVQ
ASDAEADADPATSEGIYVFTSTAPTAAATVGNRVRVSGTVVEFIPTADLGQLPLTEISFA
TYTQTGTDTLPVPVVLPQVLPTSPLDALERFEAMRVAIDSFTVTAPTKGSTNEPNATGTS
NGIFHGVIGSVPRPFREPGIQPGTPIPGGGTSPPIPRWDGNAELMTVDSDALGAPKLEVA
NGAVITGMTGPLDYGFRRYTLLIDPGATVNVTPGPAPHAAVDTVDPNAVSVAGYNLERFF
DTVNDPAIGEPILTAAAYELRKKKASLGIRDFLKTPDILGTVEVENLTVLQDLAARVNAD
AVAAGQPNPNYVAYLMEGNDVGGIDVGYLVKTGEVLPGKPRVQVVSVTQIGKDTLWTEPA
GGSSLLNDRPPLALDAIVHYADGRDFPLSVVVVHQRSLNGAETDDADGQRIRAKRQRQAE
FLATYLNQRQTDNPATRLIVLGDFNAFEFNDGYVDAMNVVTGTPSADNTTVVPGDGADLV
NPDLINLASITEPSERYSFVFDGMAQSLDHVLVNEEMVVSTSRIVPAHARINADFPEVNR
NLADSPSRLSDHDPVVTYLFPREVADIAVSAGALPDPVPVGQPYGYAVNVRNQGPGLATA
VGLGLALDAEVPSLTVTPFAQGWTCDAPQIANGKTSVACSKAQLAVSTQDTFSLSATATA
DLAGKTVKLAVAGSTTSQDPVAANDSAEASVAIVAAGPPATPISNGQSVLVSGAANEARV
YRIDVPAGARNLRIVTVGGSGDIALYAKRGSAPTASDYDQRSIRAGNNEVILIGAPQAGS
WFITVLGGSTAFANVSLRPSFVP
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggacaagcgcacgagccgccttttggcggcggcggtattgaccttagcggcggccggt
tcggcgcaggcgcaggtcgtgatcagtcaggtctacggcggcggcggcaacaacggcgcc
cgctacaagagcgatttcatcgagctgcacaacaacggcgccagcgccgtcgatctgagc
ggctggagcgtgcagtacaactcgtccgccggcaccggcgcctggcagcgcaccacgctg
accggctcgatcgcgcccggcggctactacctggtcaagcaggccgacggcaccggcggc
accgacgtgctgcccacgcccgacgtggtcggcacgatcgcgatgtccggcacctccggc
aaggtggcgctggtcaacaacgccaccgcgctcagcggcgcctgcccggccggccgcatc
gacaccgtcggcttcggcggcgcggcgacctgctcggaaggcacgccgaccgcgaacacc
gccaacgccaccggcgcggtgcgcaagaacaacggctgcaccgacaccgacaacaacagc
gccgacttcgacatcgtcgaaccgaccccgcgcaacagcgccgcgccggccttcgcctgc
gccggcggcaaccagccggtgctgtcggtcgccgacgtctcgctcgacgaaggcaacagc
ggcaccgtctcgttcgtcttcaacctgagcctgagccagccggccggcgtgggcggcgtg
gcttggtcggcctcgaccgtcgacggcaccgccaccgcgggcagcgactacgtcgccctg
gccggcgccaccggcaccatcgccgagggccagagctcgggcacggtgacggtcaccgtc
aacggcgacgccgtccaggaacccaacgagaccttccagttgcgggtccaggtcaccagc
ggcggcctgccggccccgccggcgttcgcccaggccaccgcgaccatcgccaacgatgac
gtgaccctggtgccgatccacgacatccagggcaatggcgcgacctcgccgctgaccggc
cagaccgtgaccttccagggcgtggtcaccggccgcaagagcaacggcttcttcgtccag
gccagcgacgccgaggccgatgcggatccggcgacctccgaaggcatctacgtgttcacc
agcaccgcgccgaccgcggcggccacggtgggcaaccgcgtgcgcgtgagcggcaccgtg
gtcgagttcatcccgaccgccgacctgggccagctgccgctgaccgagatcagcttcgcc
acctacacccagaccggcaccgacaccctgccggtgccggtggtgctgccgcaggtgctt
ccgacctcgccgctggacgcgctggaacgcttcgaagccatgcgcgtggcgatcgacagc
ttcacggtgaccgcgccgaccaagggcagcaccaacgagcccaacgcgaccggcaccagc
aacggcatcttccacggcgtgatcggcagcgtgccgcgtccgttccgcgagccgggcatc
cagccgggcacgccgatcccgggcggcggcacctcgccgccgatcccgcgctgggacggc
aacgccgagctgatgaccgtcgacagcgacgcgctcggcgcgccgaagctggaagtggcc
aacggcgcggtgatcaccggcatgaccggcccgctcgactacggcttccgccgctacacc
ctgctgatcgatccgggcgcgacggtcaacgtcacccccggtccggcgccgcacgcggcg
gtggacacggtcgacccgaacgcggtctcggtcgccggctacaacctcgagcgcttcttc
gacaccgtcaacgacccggcgatcggcgaaccgatcctgaccgcggccgcgtacgaactg
cgcaagaagaaggcctcgctgggcatccgcgatttcctcaagacccccgacatcctcggc
acggtcgaagtggaaaacctgaccgtgctgcaggacctcgccgcgcgcgtcaacgccgac
gcggtcgcggccggccagccgaacccgaactacgtcgcgtacctgatggaaggcaacgac
gtcggcggcatcgacgtgggttatctggtcaagaccggcgaagtgctgccgggcaagccg
cgcgtgcaggtcgtgtcggtcacccagatcggcaaggacacgctgtggactgaaccggcg
ggcggcagcagcctgctcaacgaccgtccgccgctcgcgctcgacgcgatcgtgcattac
gccgacggccgcgacttcccgctcagcgtggtggtcgtgcatcagcgttcgctcaacggc
gcggaaaccgacgatgccgacggccagcgcatccgcgccaagcgtcagcgtcaggccgag
ttcctggcgacctacctcaaccagcgtcagaccgacaacccggccacccgcctgatcgtg
ctcggcgacttcaacgcgttcgaattcaacgacggttacgtcgatgcgatgaacgtggtc
accggcacgccgagcgcggacaacaccaccgtggtgcccggcgacggcgccgatctggtc
aatcccgacctgatcaacctggccagcatcaccgagccgagcgagcgttattcgttcgtg
ttcgacggcatggcgcagagcctggaccacgtgctggtcaacgaagagatggtcgtcagc
accagccgcatcgtgccggcgcacgcgcgcatcaacgccgacttcccggaggtcaaccgc
aacctggccgactcgccctcgcgcctgtccgaccatgatccggtggtgacctatctgttc
ccgcgcgaagtcgccgacatcgcggtcagcgccggcgcgttgcccgatccggtgccggtg
ggccagccttatggttacgcggtcaacgtgcgcaatcagggccccggcctcgccaccgcg
gtcggcctgggtctcgccctcgacgccgaagtgccgtcgctgaccgtgaccccgttcgcc
cagggttggacctgcgatgcaccgcagatcgccaacggcaagacctcggtcgcctgcagc
aaggcgcagctggcggtgagcactcaggacaccttctcgttgtcggccacggccaccgcc
gacctggccggcaagacggtcaagctcgcggtcgccggcagcaccacctcgcaggacccg
gtcgccgccaacgacagcgccgaagcctcggtcgccatcgtcgccgccggcccgccggcc
acgccgatcagcaacggccagagcgtgctggtgtccggcgcggccaacgaagcgcgcgtg
tatcgcatcgacgtgccggccggtgcgcgcaacctgcgcatcgtcaccgtcggcggcagc
ggcgacatcgccctgtacgccaagcgcggcagcgcgccgaccgcgagcgactacgaccag
cgttcgatccgcgccggcaacaacgaagtgatcctgatcggcgcgccgcaggccggcagc
tggttcatcaccgtgctcggcggttcgacggccttcgccaacgtgtcgctgcgtccgagc
ttcgtgccctga
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