Lysobacter capsici: LC55x_4464
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Entry
LC55x_4464 CDS
T04162
Name
(GenBank) biotin--[acetyl-CoA-carboxylase] ligase
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
lcp
Lysobacter capsici
Pathway
lcp00780
Biotin metabolism
lcp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
LC55x_4464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcp03000
]
LC55x_4464
Enzymes [BR:
lcp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
LC55x_4464
Transcription factors [BR:
lcp03000
]
Prokaryotic type
Helix-turn-helix
Other families
LC55x_4464
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPL_LplA_LipB
HTH_11
BPL_C
HTH_24
Nuc_rec_co-act
HVO_A0261_N
HTH_20
HTH_AsnC-type
AbfS_sensor
Rrf2
Motif
Other DBs
NCBI-ProteinID:
ALN87712
LinkDB
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Position
complement(4949799..4950797)
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AA seq
332 aa
AA seq
DB search
MDDRALLQRLIEGPATGDALASAAGQTRAAVWKRIEALREAGVAIEAKPGRGYALSQPLD
LLDAQAIIAAMQADSRARLAALDVAWTIDSTNSELLRRPTPAQGAAVLLAERQTGGRGRR
GRVWTSPLAAHLYLSLSRSFGGGLARLGGLSLVAGIAAVEALQRLGYADVRLKWPNDLVV
LDGAGLRKLGGLLVEGGGEYAGPARAVIGLGLNVRMPAAAAAQIDQPWCDLATLAAQRAL
SRNAVVAALLDSLLPALDEFDAAGLAPFIDRYAAFDALAGQAVTVHGAQADHAGIAIGLA
DDGALRVRLADGEERRFHAGEVSVRRGAGDAR
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggacgatcgcgcgctgctgcaacgcctgatcgaaggtcccgccaccggcgacgcattg
gccagcgcggccgggcagacccgcgccgcggtgtggaaacgcatcgaggccttgcgcgaa
gccggggtcgcgatcgaggccaagcccggtcgcggctatgccttgtcgcagccgctcgac
ctgctcgacgcgcaggcgatcatcgccgccatgcaggccgattcgcgcgcgcgtctggcg
gcgctggatgtggcctggacgatcgattcgaccaacagcgaactgctgcgccggcccacg
cccgcgcagggcgccgcggtgctgctggccgaacgccagaccggcgggcgcggccggcgc
ggccgggtctggacctcgccgctggccgcgcatctgtacctgtcgctgtcgcgcagcttc
ggcggcggcctcgcccgtctgggcgggctgagcctggtcgccggcatcgccgcggtcgag
gccttgcagcgcctgggctacgccgacgtgcgattgaaatggccaaacgatctggtcgtg
ctcgacggcgccggcctgcgcaagctcggcggcctgctggtcgagggcggcggcgaatac
gccggtccggcacgggcggtgatcggcctcggcctcaacgtgcgcatgccggccgcggcc
gcggcgcagatcgatcaaccctggtgcgatctggcgacgctcgcggcgcaacgcgcgctg
tcgcgcaacgccgtcgtggccgccttgctcgacagcctgctgccggcgctggacgaattc
gacgccgccggcctggcgcctttcatcgaccgctacgccgcgttcgatgccctggccggg
caggcggtgaccgtccacggcgcccaggccgatcatgccggcatcgcgatcggcctggcc
gacgacggcgcgctgcgggtgcgtctggccgatggcgaggaacgccgtttccatgccggc
gaagtcagcgtgcgccgcggcgcgggagacgcgcgatga
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