Lysobacter capsici: LC55x_4480
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Entry
LC55x_4480 CDS
T04162
Name
(GenBank) rtcR transcriptional regulator RtcR transcriptional activator
KO
K14414
transcriptional regulatory protein RtcR
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcp03000
]
LC55x_4480
Transcription factors [BR:
lcp03000
]
Prokaryotic type
Other transcription factors
Others
LC55x_4480
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
Mg_chelatase
AAA
NACHT
AAA_16
AAA_22
MCM
AAA_19
AAA_30
ATPase_2
AAA_2
bpMoxR
AAA_7
AAA_14
AAA_33
TniB
Motif
Other DBs
NCBI-ProteinID:
ALN87728
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Position
4967762..4969354
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AA seq
530 aa
AA seq
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MKRQVVIGMLGTQLDAASGPGRWEKWRPTVSLGMHEDFLLDRLELIVDERRFGKLAHLVA
QDLAQVSPETQVRRHDTFLADPWDFESVYGVLHDFVRAYDFQPEDEDYYVHITTGTHVSQ
ICWFLLTESRLFPGRLLQTAPPRKQTGQAPGTYAVIDLDLSRYDRIAQRFAQERLHDRDL
LKSGIATRNPAFNRMIEQIETVATRSKSPMLLMGPTGAGKSQLARRVFELKKQKHQLPGR
FVEVNCATLRGDGAMSTLFGHIKGAYTGASTDRAGLLRSAHQGLLFLDEIGELGQDEQAM
LLRALEEKRFLPVGGDKEVESDFQLIAGTNRDLQVAVHEGRFRDDLLARLNLWTYRLPGL
AERAEDIEPNLDFELERHSRENRQRVTFNREARERYLTFARSGEATWGGNFRDLGASVMR
LATLAEGGRIRLDLVEEEIERLRRQWHGAGAQRSLLDEVLGEGAAQLDRFDRVQLEDVLR
VCRQAKNLSQAGRELFAVSRSLKASSNDADRLRKYLARFGLDWEQLRAGV
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgccaggtcgtcatcggcatgctcggcacccaactcgacgcggcctccggcccg
ggccgctgggaaaagtggcgtccgaccgtctcgctgggcatgcacgaggacttcctgctc
gaccgcctggagctgatcgtcgacgagcgccgcttcggcaagctcgctcatctggtcgcg
caggatctggcccaggtctcgccggagacccaggtgcggcgccacgacaccttcctcgcc
gacccttgggatttcgaaagcgtctacggcgtgctgcacgacttcgtgcgcgcctacgat
ttccagcccgaggacgaggactactacgtccacatcaccacaggcacccacgtcagccag
atctgctggttcctgctgaccgaaagccgattgttcccgggacgactgctgcagaccgcg
ccgccgcgcaaacagacaggccaggcgccgggcacgtatgcggtgatcgacctggacctg
tcgcgctacgaccgtatcgcccaacgtttcgcgcaggaacggctgcacgatcgcgacctg
ctcaagagcggcatcgccacccgcaatcccgccttcaaccgcatgatcgagcagatcgaa
accgtcgccacgcgctcgaagtcgccgatgctgctgatgggcccgaccggcgccggcaag
agccagctcgcgcggcgcgtgttcgaactcaagaagcagaagcaccagctgcccgggcgc
ttcgtcgaagtgaactgcgcgaccttgcgcggcgacggcgcgatgagcaccttgttcggc
catatcaagggcgcctacaccggcgcgtcgaccgaccgcgccggcctgctgcgttcggcg
caccagggcctgctgttcctcgacgagatcggcgaactgggccaggacgaacaggcgatg
ctgctgcgcgcgctggaggaaaaacgcttcctgccggtcggcggcgacaaggaagtcgaa
agcgatttccagttgatcgccggcaccaaccgcgatctgcaggtcgcggtgcatgaaggc
cgttttcgcgacgacctgctcgcgcgcctgaacctgtggacgtatcgcctgcccggcctg
gccgagcgcgccgaggacatcgagccgaatctggatttcgaactcgagcgtcactcacgc
gaaaaccgccagcgggtgaccttcaaccgcgaagcgcgcgaacgttatctgaccttcgcg
cgcagcggcgaagcgacctggggcggcaacttccgcgacctgggcgcgtcggtgatgcgg
ctggcgacgttggccgagggcggtcgcatccgcctggatctggtcgaggaggaaatcgaa
cgtctgcgccggcaatggcacggcgcgggcgcgcagcgatcgttgctcgatgaggttctc
ggcgaaggcgcggcgcagctcgatcgcttcgaccgggtgcagctggaagacgtgctgcgc
gtatgccggcaggcgaagaacctgtcgcaggccggacgcgagttgttcgcggtgtcgcgt
tcgctcaaggccagcagcaacgacgccgatcgcttgcgcaaatatctggcgcggttcggg
ctcgattgggagcaattgcgcgccggggtctga
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