Lysobacter capsici: LC55x_4481
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Entry
LC55x_4481 CDS
T04162
Name
(GenBank) ycaO-like family protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lcp03009
]
LC55x_4481
Ribosome biogenesis [BR:
lcp03009
]
Prokaryotic type
ribosomal protein modification factors
LC55x_4481
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
Motif
Other DBs
NCBI-ProteinID:
ALN87729
LinkDB
All DBs
Position
complement(4969376..4970719)
Genome browser
AA seq
447 aa
AA seq
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MARALSRAMHSPSCTACTTGEEQGMIPYERERSLDEANRIIHACIARRGWSAQTGEFGHG
LVTIKCALHDAQGRLLSRGSGKGEPAASLTGALYEAVEHYYCRASALASEPRFVAARELA
DDPRCAGLPFVSEFADQSQRHLACRQYASYSGRADLAVPLFMVFPDYPPAVELRDPRDDF
DYHSATRYSSNSGTAIGASFEEAALHGIGEIVERDAWALFMLAHYLGAPARYGRLIEPSS
LPAELARIHELAQRRLERRVLLIDVTSDLAYPAFIATTEERLPEEIVFPHGCGASPYAAH
AATRALTELTQCVDIKENAPHLVELDQLALDLLVDYPKLRACVMGEIDPRRLHHAHWDYP
QLPWQAPKQLLPRVVADLEARGIGLYHAINHQEGDEFCVVSSVSMELERFFLASTGLLMA
PGRRGRECLARQALAAQAQREAQPQEA
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgcactgtcgcgcgccatgcattcgccctcatgcaccgcatgcaccactggc
gaggaacaaggaatgattccgtacgaacgagagcgcagcctggacgaggccaaccgcatc
atccacgcctgcatcgcgcgacgcggctggagcgcgcagaccggtgagttcggccacggt
ctggtcacgatcaagtgcgccctgcacgatgcgcaggggcgactgctcagccgcggttcc
ggcaagggcgaacccgccgcctcgttgaccggcgccttgtatgaagcggtcgaacactac
tactgccgcgcctccgcgctggccagcgagccgcggttcgtagccgcgcgcgaactcgcc
gacgacccgcgctgcgccggcctgccgttcgtgtccgagttcgccgatcaatcccagcgc
catctggcgtgccgccagtacgcgtcgtattcgggccgggccgatctggccgtgccgttg
ttcatggtgtttcccgattatccacccgcggtcgagttgcgcgatccgcgcgacgatttc
gactaccacagcgcgacccgctacagctccaacagcggcaccgcgatcggcgccagcttc
gaggaagccgcgctgcacggcatcggcgagatcgtcgaacgcgatgcgtgggcgttgttc
atgctcgcgcactacctcggcgcgccggcgcgttacggccgcctgatcgagccgtcgtcg
ctgccggccgagcttgcgcgcatccacgagcttgcgcagcgccgtctcgaacgtcgcgta
ctgctgatcgacgtgaccagcgacctggcctatccggccttcatcgccacgaccgaggaa
cgcttgcccgaggaaatcgtgtttccgcacggctgcggcgcatcgccctatgccgcgcat
gcggcgacgcgcgcattgaccgaactgacccagtgcgtggacatcaaggaaaacgcgccg
catctggtcgaactcgatcagctcgcattggatctgctggtcgactaccccaagctgcgc
gcctgcgtgatgggcgagatcgatccgcgacgcctgcatcatgcgcactgggactatccg
cagttgccgtggcaggcaccgaagcagttgctgccgcgggtcgtggccgatctggaagcg
cgcggcatcggcttgtaccacgcgatcaatcaccaggaaggcgacgagttctgcgtggtc
agcagcgtgtcgatggaactggaacggttcttcctcgccagcaccggcctgttgatggcg
ccgggccggcgtggacgcgagtgtctggcgcgtcaggcgttggcggcgcaggcgcagcgc
gaggcgcagccgcaggaggcgtga
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