Lysobacter capsici: LC55x_4578
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Entry
LC55x_4578 CDS
T04162
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
lcp
Lysobacter capsici
Pathway
lcp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LC55x_4578 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcp03400
]
LC55x_4578 (uvrA)
DNA repair and recombination proteins [BR:
lcp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LC55x_4578 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LC55x_4578 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
nSTAND1
DnaJ_CXXCXGXG
AAA_21
AAA_29
AAA_16
AAA_25
RsgA_GTPase
DUF4350
DUF5351
Motif
Other DBs
NCBI-ProteinID:
ALN87826
UniProt:
A0A0S2FW99
LinkDB
All DBs
Position
complement(5067150..5069789)
Genome browser
AA seq
879 aa
AA seq
DB search
MAKQSTRNNPGFGAFVSVRGAREHNLKDIDVDIPRDALVVFSGVSGSGKSSLAFGTLFAE
AQRRYLESLSPYARRLIDQVGVPDVDAIDGLPPAVALQQQRGTPNVRSTVGSVTTLSSLL
RMLYSRAGTYPPKQPMLYAEDFSPNTPQGACPNCHGLGYVYEVTERAMVPDPSLSIRDRA
IASWPPAWHGQNLRDILVTLGYDVDVPWRDLPKKDRDWILYTEEQPVAPVYAGFTPAQTR
AALRRKAEPSYMGTFTGARRYVLHTFATTQSALMKKRVARFMSGAPCPVCDGRRLKREAL
SVTFAGLDIGSLSRLSLNRIAEVLAPAASGRFDVPTKATTRSRAASAQDTAKRVAAGGSA
HAGGTDVRRTPDLSEEKRIAAQRIAHDLVERIATLQALGLGYLAMDRTTPTLSPGELQRL
RLATQIRSNLFGVVYVLDEPSAGLHPADSEALHRALDQLKDAGNSVFVVEHDLDMMRRAD
WLVDVGPDAGQNGGQILYSGPPDGLRAVAASHTARYLFAADDAAAKQARTPRSPSGWLEL
RGLHRNNLHGLDARFPLGVFTAVTGVSGSGKSSLVSQALVELVGDHLGHEPPVEESDSGE
PQPSEIAKTAGRIHSGADAIKRLVNVDQKPIGRTPRSNLATYTGLFDHVRKLFAGTPLAK
SRRYNAGRFSFNVAQGRCETCEGEGFVQVELLFMPTVYAPCPTCHGSRYNAKTLEVVLNG
RSIAEVLAMTVDEALAFFADEDAVRRPLTLLRDIGLGYLRLGQPATELSGGEAQRIKLAT
ELQRSQHGNSLYVLDEPTTGLHPADVDKLMAQLHGLVDAGNTVIVVEHEMRVVADSDWVI
DVGPGAGEDGGAIVASGTPQQVARAKASRTAPYLRRVLG
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcaatccactcgaaacaatcccggcttcggcgcgttcgtcagcgtgcgcggc
gcacgcgagcacaacctcaaggacatcgacgtcgatatcccgcgcgatgcgctggtggtg
ttcagcggcgtgtcgggctcgggaaaatcctcgctggcgttcggcaccttgttcgccgag
gcgcagcgccgttatctggaatcgctgtcgccgtatgcgcggcgcctgatcgatcaggtc
ggcgtgcccgacgtggacgcgatcgacggcctgccgccggcggtggcgctgcaacaacag
cgcggcaccccgaacgtacgctcgacggtcggcagcgtcaccacgctgtcgagcctgctg
cgcatgctgtactcgcgcgccggcacctatccgcccaagcagccgatgctgtacgccgag
gatttctcgccgaacacgccgcaaggcgcttgcccgaattgccacgggctgggctatgtg
tatgaagtcaccgaacgggcgatggtgcccgacccatcgctgagcatccgcgaccgcgcg
atcgcctcgtggccgccggcctggcacggacagaacctgcgcgacatcctggtcaccctg
ggctacgacgtcgacgtgccctggcgcgatctgccgaagaaggaccgcgactggatcctg
tacaccgaggagcaaccggtcgcgccggtgtatgccggcttcacccccgcgcagacccgc
gccgcgctgcgccgcaaggccgagccgagctacatggggaccttcaccggcgcgcgccgt
tacgtgctgcacaccttcgccaccacccagagcgcgttgatgaaaaaacgcgtggcgcgc
ttcatgagcggcgcgccgtgtccggtctgcgacggccgccgcctgaaacgcgaagcgttg
tcggtgacctttgctggactggacatcggcagtctgtcgcggctgtcgctcaaccgcatc
gccgaagtgctggcgccggccgccagtggacgcttcgacgtgccgaccaaggccaccacg
cgcagccgcgcggccagcgcccaggacaccgccaaacgcgtcgccgcgggcggatcggcg
catgccggcggcaccgatgtgcgccgcacgccggacctgtccgaggaaaaacgcatcgcc
gcgcaacgcatcgcccacgatctggtcgaacgcatcgcgaccttgcaggccttgggcctg
ggctatctggcgatggaccggaccacgccgaccttgtcgccgggcgaactgcagcgactg
cgtctggcgacccagatccgctccaacctgttcggcgtggtctacgtgctggacgaaccg
tccgccggcctgcatccggccgacagcgaagcgctgcatcgcgcgctggaccaactcaag
gacgccggcaattcggtgttcgtggtcgagcacgatctggacatgatgcggcgcgccgat
tggctggtggacgtggggccggacgcgggacagaacggcggacaaattctctacagcggc
ccgcccgatggcttgcgcgcggtcgccgcgtcgcacacagcgcgttatctgttcgccgcc
gacgatgccgccgcgaagcaggcgcgaacgccgcgctcgccgagcggctggctggaactg
cgcggcctgcatcgcaataacctgcacggcctggatgcgcgctttccgctgggcgtgttc
accgccgtcaccggcgtgtcgggctcgggcaaatccagcctggtcagccaggccctggtc
gaactggtcggcgaccatctcggccacgagccgccggtcgaagagtccgacagcggcgaa
ccgcagcccagcgaaatcgccaagaccgctggacgtattcacagcggcgccgacgcgatc
aagcgcctggtcaacgtcgaccagaaaccgatcggacgcacgccgcgctcgaatctggcg
acctacaccggcctgttcgatcacgtgcgcaaactgttcgccggcacgccgctggccaag
agccggcgctacaacgccggccggttctcgttcaacgtcgcgcaggggcgctgcgaaacc
tgcgaaggcgagggcttcgtccaggtcgaactgttgttcatgccgaccgtgtacgcgccg
tgcccgacctgccacggcagccgctacaacgcgaagacgcttgaagtcgtgttgaacggc
cgcagcatcgccgaggtgctggcgatgacggtcgacgaggcgctggcgttcttcgccgac
gaagacgcggtgcggcgtccgctgaccctgttgcgcgacatcggcctgggttatctgcgt
ctgggccagccggcgaccgaactgtccggcggcgaagcccagcgcatcaagctggccacc
gagttgcaacgcagccagcacggcaacagcctgtacgtgctcgatgagcccacgactggg
ttgcatccggccgatgtcgacaagctgatggcgcaactgcacggcctggtcgatgccggc
aatacggtgatcgtggtcgaacacgaaatgcgcgtggtcgccgacagcgactgggtgatc
gacgtcggccccggcgcgggcgaagacggcggcgcgatcgtcgccagcggaacgccgcag
caggtcgctcgcgccaaggcgagccggaccgcgccgtatctgcggcgggtgctcggctga
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