KEGG   Lysobacter capsici: LC55x_4578
Entry
LC55x_4578        CDS       T04162                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
lcp  Lysobacter capsici
Pathway
lcp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lcp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LC55x_4578 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lcp03400]
    LC55x_4578 (uvrA)
DNA repair and recombination proteins [BR:lcp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LC55x_4578 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      LC55x_4578 (uvrA)
SSDB
Motif
Pfam: ABC_tran UvrA_DNA-bind nSTAND1 DnaJ_CXXCXGXG AAA_21 AAA_29 AAA_16 AAA_25 RsgA_GTPase DUF4350 DUF5351
Other DBs
NCBI-ProteinID: ALN87826
UniProt: A0A0S2FW99
LinkDB
Position
complement(5067150..5069789)
AA seq 879 aa
MAKQSTRNNPGFGAFVSVRGAREHNLKDIDVDIPRDALVVFSGVSGSGKSSLAFGTLFAE
AQRRYLESLSPYARRLIDQVGVPDVDAIDGLPPAVALQQQRGTPNVRSTVGSVTTLSSLL
RMLYSRAGTYPPKQPMLYAEDFSPNTPQGACPNCHGLGYVYEVTERAMVPDPSLSIRDRA
IASWPPAWHGQNLRDILVTLGYDVDVPWRDLPKKDRDWILYTEEQPVAPVYAGFTPAQTR
AALRRKAEPSYMGTFTGARRYVLHTFATTQSALMKKRVARFMSGAPCPVCDGRRLKREAL
SVTFAGLDIGSLSRLSLNRIAEVLAPAASGRFDVPTKATTRSRAASAQDTAKRVAAGGSA
HAGGTDVRRTPDLSEEKRIAAQRIAHDLVERIATLQALGLGYLAMDRTTPTLSPGELQRL
RLATQIRSNLFGVVYVLDEPSAGLHPADSEALHRALDQLKDAGNSVFVVEHDLDMMRRAD
WLVDVGPDAGQNGGQILYSGPPDGLRAVAASHTARYLFAADDAAAKQARTPRSPSGWLEL
RGLHRNNLHGLDARFPLGVFTAVTGVSGSGKSSLVSQALVELVGDHLGHEPPVEESDSGE
PQPSEIAKTAGRIHSGADAIKRLVNVDQKPIGRTPRSNLATYTGLFDHVRKLFAGTPLAK
SRRYNAGRFSFNVAQGRCETCEGEGFVQVELLFMPTVYAPCPTCHGSRYNAKTLEVVLNG
RSIAEVLAMTVDEALAFFADEDAVRRPLTLLRDIGLGYLRLGQPATELSGGEAQRIKLAT
ELQRSQHGNSLYVLDEPTTGLHPADVDKLMAQLHGLVDAGNTVIVVEHEMRVVADSDWVI
DVGPGAGEDGGAIVASGTPQQVARAKASRTAPYLRRVLG
NT seq 2640 nt   +upstreamnt  +downstreamnt
atggcaaagcaatccactcgaaacaatcccggcttcggcgcgttcgtcagcgtgcgcggc
gcacgcgagcacaacctcaaggacatcgacgtcgatatcccgcgcgatgcgctggtggtg
ttcagcggcgtgtcgggctcgggaaaatcctcgctggcgttcggcaccttgttcgccgag
gcgcagcgccgttatctggaatcgctgtcgccgtatgcgcggcgcctgatcgatcaggtc
ggcgtgcccgacgtggacgcgatcgacggcctgccgccggcggtggcgctgcaacaacag
cgcggcaccccgaacgtacgctcgacggtcggcagcgtcaccacgctgtcgagcctgctg
cgcatgctgtactcgcgcgccggcacctatccgcccaagcagccgatgctgtacgccgag
gatttctcgccgaacacgccgcaaggcgcttgcccgaattgccacgggctgggctatgtg
tatgaagtcaccgaacgggcgatggtgcccgacccatcgctgagcatccgcgaccgcgcg
atcgcctcgtggccgccggcctggcacggacagaacctgcgcgacatcctggtcaccctg
ggctacgacgtcgacgtgccctggcgcgatctgccgaagaaggaccgcgactggatcctg
tacaccgaggagcaaccggtcgcgccggtgtatgccggcttcacccccgcgcagacccgc
gccgcgctgcgccgcaaggccgagccgagctacatggggaccttcaccggcgcgcgccgt
tacgtgctgcacaccttcgccaccacccagagcgcgttgatgaaaaaacgcgtggcgcgc
ttcatgagcggcgcgccgtgtccggtctgcgacggccgccgcctgaaacgcgaagcgttg
tcggtgacctttgctggactggacatcggcagtctgtcgcggctgtcgctcaaccgcatc
gccgaagtgctggcgccggccgccagtggacgcttcgacgtgccgaccaaggccaccacg
cgcagccgcgcggccagcgcccaggacaccgccaaacgcgtcgccgcgggcggatcggcg
catgccggcggcaccgatgtgcgccgcacgccggacctgtccgaggaaaaacgcatcgcc
gcgcaacgcatcgcccacgatctggtcgaacgcatcgcgaccttgcaggccttgggcctg
ggctatctggcgatggaccggaccacgccgaccttgtcgccgggcgaactgcagcgactg
cgtctggcgacccagatccgctccaacctgttcggcgtggtctacgtgctggacgaaccg
tccgccggcctgcatccggccgacagcgaagcgctgcatcgcgcgctggaccaactcaag
gacgccggcaattcggtgttcgtggtcgagcacgatctggacatgatgcggcgcgccgat
tggctggtggacgtggggccggacgcgggacagaacggcggacaaattctctacagcggc
ccgcccgatggcttgcgcgcggtcgccgcgtcgcacacagcgcgttatctgttcgccgcc
gacgatgccgccgcgaagcaggcgcgaacgccgcgctcgccgagcggctggctggaactg
cgcggcctgcatcgcaataacctgcacggcctggatgcgcgctttccgctgggcgtgttc
accgccgtcaccggcgtgtcgggctcgggcaaatccagcctggtcagccaggccctggtc
gaactggtcggcgaccatctcggccacgagccgccggtcgaagagtccgacagcggcgaa
ccgcagcccagcgaaatcgccaagaccgctggacgtattcacagcggcgccgacgcgatc
aagcgcctggtcaacgtcgaccagaaaccgatcggacgcacgccgcgctcgaatctggcg
acctacaccggcctgttcgatcacgtgcgcaaactgttcgccggcacgccgctggccaag
agccggcgctacaacgccggccggttctcgttcaacgtcgcgcaggggcgctgcgaaacc
tgcgaaggcgagggcttcgtccaggtcgaactgttgttcatgccgaccgtgtacgcgccg
tgcccgacctgccacggcagccgctacaacgcgaagacgcttgaagtcgtgttgaacggc
cgcagcatcgccgaggtgctggcgatgacggtcgacgaggcgctggcgttcttcgccgac
gaagacgcggtgcggcgtccgctgaccctgttgcgcgacatcggcctgggttatctgcgt
ctgggccagccggcgaccgaactgtccggcggcgaagcccagcgcatcaagctggccacc
gagttgcaacgcagccagcacggcaacagcctgtacgtgctcgatgagcccacgactggg
ttgcatccggccgatgtcgacaagctgatggcgcaactgcacggcctggtcgatgccggc
aatacggtgatcgtggtcgaacacgaaatgcgcgtggtcgccgacagcgactgggtgatc
gacgtcggccccggcgcgggcgaagacggcggcgcgatcgtcgccagcggaacgccgcag
caggtcgctcgcgccaaggcgagccggaccgcgccgtatctgcggcgggtgctcggctga

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