Lysobacter capsici: LC55x_4665
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Entry
LC55x_4665 CDS
T04162
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
lcp
Lysobacter capsici
Pathway
lcp00550
Peptidoglycan biosynthesis
lcp01100
Metabolic pathways
lcp01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LC55x_4665 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LC55x_4665 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lcp01011
]
LC55x_4665 (mrdA)
Enzymes [BR:
lcp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LC55x_4665 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
lcp01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
LC55x_4665 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
ANAPC_CDC26
Motif
Other DBs
NCBI-ProteinID:
ALN87913
LinkDB
All DBs
Position
complement(5154974..5157241)
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AA seq
755 aa
AA seq
DB search
MGPRRRLLGRHPLKKRVLKNTAAEADQFRLRAAVAFACVLIGVIGLGFWYFRLQVWQHDD
YAMRSEANRVKLRPVVPGRGLIYDRQGRILADNVPAFRIEVTPSEAGDSEDWLPQLAKVV
ALTPEDIARFEDERRASRGFKPIVLKMRVSDEEVAAFAVDRWRFPGVELVSYLNRRYPYG
ELFAHVIGYVGRIDTKDQEAMGRSVLTHTGKTGLERSYEEQLRGQIGYEQIETNVDGRPI
RQVGHVPAKPGADLRLSIDLDLQRAMVTAFGDMDGSAVAVDPRTGEVLGMVSLPSYDSNL
FVNGISSVDYKTLNDDPSRPQFNRNVLGGGPPGSTMKPFMALAGLDSGFRRAEDKTLSTG
EFHIAGQKRGYRDSHGGGHGWVDLRESIAQSVNTYYYKLALEMGIDRVDQYMTRYGFGQK
TGIDLLGENIGILPSPAWKAKRNKKEGWYPGETVIAGIGQGYWVVTALQLARGTAAIADG
GNLRQLHLVREIRTGYESPWVPKVLQPTTRITDNPAHLQAVHEGMEATIHGGRGTATMMA
RGAPYRMAGKTGTAQKVSRKGNVSMNPHSLPFHLRHQALFVGYAPADNPTIAVAVVVEHG
GYGGSTAAPIARKIFDAWLLGKMPEPIVPKDAPAPTVAPLAANGAAPKPSATSKLGEAAA
QAEQDAPKGRPVAVNGAWAESVAQINARVASQPGHTPQVLQGPSMLRPALPGYVPSQTPS
EAPRSDDALIEPDLDPEASDDDAAPVTAPTTEPRR
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgggcccgcgccgccgcctgctcggacggcatccgctgaaaaagcgggtgctgaagaac
accgcggccgaggccgaccagttccgcctgcgcgccgccgtcgccttcgcctgcgtgctg
atcggggtgatcggcctgggcttctggtacttccgcctgcaggtgtggcagcacgacgac
tacgccatgcgctcggaggccaaccgggtcaagctgcgtccggtggtgcccggccgcggc
ctgatctacgaccgccagggccgcatcctggccgacaacgtgcccgcgttccggatcgaa
gtgaccccgagcgaagccggcgacagcgaagactggctgccgcagttggccaaggtggtc
gcgctgacgcccgaggacatcgcgcggttcgaagacgaacgccgcgcatcgcgcggattc
aagcccatcgtcctgaagatgcgggtcagcgacgaagaagtcgccgcgttcgcggtcgac
cgctggcgtttccccggcgtcgaactggtctcctacctcaatcgccgctatccctacggc
gagttgttcgcgcacgtgatcggctacgtcggccgcatcgacaccaaggaccaggaggcg
atggggcgcagcgtgctgacccacaccggcaagaccggcctggagcgctcctacgaagaa
caactgcgcggccagatcggctacgagcagatcgaaaccaacgtcgacggccgcccgatc
cgccaggtcggccacgtcccggccaaacccggcgccgacctgcgcctgagcatcgacctg
gacctgcagcgcgcgatggtcaccgccttcggcgacatggacggctcggcggtcgcggtc
gatccgcgcaccggcgaagtgctgggcatggtcagcctgccgagctacgacagcaatctg
ttcgtcaacggcatctccagcgtcgactacaagacgctcaacgacgacccctcgcggccg
cagttcaaccgcaacgtgctcggcggcggcccgccgggttcgaccatgaaaccgttcatg
gccctggccggcctcgacagcggtttccgccgcgccgaagacaagaccttgtcgaccggc
gagttccacatcgccgggcagaaacgcggctatcgcgattcgcacggcggcggccacggc
tgggtcgatctgcgcgaatcgatcgcgcagtcggtcaatacttactactacaagctcgcg
ctggagatgggcatcgaccgcgtcgatcagtacatgacgcgttacggcttcggccagaag
accggcatcgacctgctcggcgaaaacatcggcatcctgccgtcgccggcgtggaaggcc
aagcgcaacaagaaggaaggctggtacccgggcgagaccgtgatcgccggcatcggccag
ggctattgggtggtgaccgcgctgcagctcgcgcgcggcaccgccgcgatcgccgacggc
ggcaacctgcgccagttgcatctggtgcgcgagatccgcaccggttacgaatcgccgtgg
gtgcccaaggtgctgcaacccaccacccgcatcaccgacaaccccgcgcatctgcaagcc
gtgcacgaaggcatggaagcgaccatccacggcggccgcggcaccgcgacgatgatggcg
cgcggcgcgccgtaccgcatggccggcaagaccggcaccgcgcagaaggtcagccgcaag
ggcaacgtcagcatgaatccgcattcgctgccgttccatctgcgccatcaagccttgttt
gtcggttacgcgccggccgacaacccgaccatcgcggtcgcggtggtggtcgaacacggc
ggctacggtggcagcaccgccgcgccgatcgcgcgcaagatcttcgacgcctggctgctc
ggcaagatgcccgaaccgatcgtgccgaaggacgcgcccgcgccgaccgtcgcgccgctg
gccgccaacggcgccgcgcccaagcccagcgccacctccaagctcggcgaagccgccgcc
caggccgaacaggacgcacccaaaggccggcccgtcgcggtcaatggcgcctgggccgaa
tcggtcgcgcagatcaacgcgcgcgtcgccagccagcccggccacaccccgcaggtgttg
caaggcccttcgatgctgcgcccggccttgcccggctacgtgccgagccagacgccgagc
gaagcgccgcgcagcgacgacgcgctgatcgaacccgacctcgaccccgaagccagcgac
gacgacgcggcgccggtcaccgcgccgaccacggaaccgcgccggtga
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