KEGG   Lysobacter capsici: LC55x_4688
Entry
LC55x_4688        CDS       T04162                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
lcp  Lysobacter capsici
Pathway
lcp00300  Lysine biosynthesis
lcp00470  D-Amino acid metabolism
lcp01100  Metabolic pathways
lcp01110  Biosynthesis of secondary metabolites
lcp01120  Microbial metabolism in diverse environments
lcp01230  Biosynthesis of amino acids
Module
lcp_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:lcp00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    LC55x_4688 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    LC55x_4688 (dapF)
Enzymes [BR:lcp01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     LC55x_4688 (dapF)
SSDB
Motif
Pfam: DAP_epimerase CntK_N
Other DBs
NCBI-ProteinID: ALN87936
LinkDB
Position
complement(5179983..5180825)
AA seq 280 aa
MRFSKMHGAGNDFVVLDLRGGLAPPDADNCRRLADRHFGVGCDQILTIEDPLSDGAVASY
RIWNADGSTSQQCGNGARCIAAWLVRDGAAASGADADGGFFVDSPAGRHAVQPLGGDAYR
IGMGRPEFEPARIPLLGYAARQDQYVLDIHDTVFGFGAVSMGNPHAVIEVDDVDAAPVES
IGPLLQSSAAFPESANIGFAQVIAPDRIKLRVYERGSGETLACGSGACAAAAVLMQRGRI
GRDVRVQLPGGELRIVWPDDESALSMSGPTAFVFEGEWNR
NT seq 843 nt   +upstreamnt  +downstreamnt
atgcgcttcagcaagatgcacggcgccggcaacgacttcgtggtgttggacctgcgcggc
ggcctcgcgccgcccgatgccgacaactgccgtcgcctcgccgaccgccatttcggggtc
ggctgcgatcagatcctgaccatcgaagatccgctcagcgacggcgccgtcgcctcgtac
cggatctggaacgccgacggttcgacctcgcagcaatgcggcaacggcgcgcgctgcatc
gccgcctggctggtgcgcgacggcgcggccgcaagcggcgccgatgccgacggcggcttc
ttcgtcgacagcccggccggccgccacgcggtgcaacccttgggcggcgacgcctatcgc
atcggcatgggccggcccgagttcgaacccgcgcgcattcccttgctcggctatgccgcg
cgtcaggatcagtacgtgctcgacatccacgacaccgtgttcggtttcggcgcggtgtcg
atgggcaacccgcatgcggtgatcgaagtcgacgacgtcgacgccgcgccggtcgaaagc
atcggcccgctgctgcaatcgagcgcggcgtttcccgaatcggccaacatcgggttcgcc
caggtgatcgcgccggaccggatcaagctgcgcgtgtacgagcgcggttccggcgaaacc
ctcgcctgcggcagcggcgcctgcgccgccgccgcggtgctgatgcaacgcggccgcatc
ggccgcgacgtgcgcgtgcagttgcccggcggcgaactgcgcatcgtctggcccgacgac
gagtcggcgctgtcgatgtccggcccgaccgcattcgtcttcgaaggagagtggaaccga
tga

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