Lysobacter capsici: LC55x_4688
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Entry
LC55x_4688 CDS
T04162
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
lcp
Lysobacter capsici
Pathway
lcp00300
Lysine biosynthesis
lcp00470
D-Amino acid metabolism
lcp01100
Metabolic pathways
lcp01110
Biosynthesis of secondary metabolites
lcp01120
Microbial metabolism in diverse environments
lcp01230
Biosynthesis of amino acids
Module
lcp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LC55x_4688 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LC55x_4688 (dapF)
Enzymes [BR:
lcp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LC55x_4688 (dapF)
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Paralog
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
ALN87936
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All DBs
Position
complement(5179983..5180825)
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AA seq
280 aa
AA seq
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MRFSKMHGAGNDFVVLDLRGGLAPPDADNCRRLADRHFGVGCDQILTIEDPLSDGAVASY
RIWNADGSTSQQCGNGARCIAAWLVRDGAAASGADADGGFFVDSPAGRHAVQPLGGDAYR
IGMGRPEFEPARIPLLGYAARQDQYVLDIHDTVFGFGAVSMGNPHAVIEVDDVDAAPVES
IGPLLQSSAAFPESANIGFAQVIAPDRIKLRVYERGSGETLACGSGACAAAAVLMQRGRI
GRDVRVQLPGGELRIVWPDDESALSMSGPTAFVFEGEWNR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttcagcaagatgcacggcgccggcaacgacttcgtggtgttggacctgcgcggc
ggcctcgcgccgcccgatgccgacaactgccgtcgcctcgccgaccgccatttcggggtc
ggctgcgatcagatcctgaccatcgaagatccgctcagcgacggcgccgtcgcctcgtac
cggatctggaacgccgacggttcgacctcgcagcaatgcggcaacggcgcgcgctgcatc
gccgcctggctggtgcgcgacggcgcggccgcaagcggcgccgatgccgacggcggcttc
ttcgtcgacagcccggccggccgccacgcggtgcaacccttgggcggcgacgcctatcgc
atcggcatgggccggcccgagttcgaacccgcgcgcattcccttgctcggctatgccgcg
cgtcaggatcagtacgtgctcgacatccacgacaccgtgttcggtttcggcgcggtgtcg
atgggcaacccgcatgcggtgatcgaagtcgacgacgtcgacgccgcgccggtcgaaagc
atcggcccgctgctgcaatcgagcgcggcgtttcccgaatcggccaacatcgggttcgcc
caggtgatcgcgccggaccggatcaagctgcgcgtgtacgagcgcggttccggcgaaacc
ctcgcctgcggcagcggcgcctgcgccgccgccgcggtgctgatgcaacgcggccgcatc
ggccgcgacgtgcgcgtgcagttgcccggcggcgaactgcgcatcgtctggcccgacgac
gagtcggcgctgtcgatgtccggcccgaccgcattcgtcttcgaaggagagtggaaccga
tga
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