Lysobacter capsici: LC55x_4822
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Entry
LC55x_4822 CDS
T04162
Name
(GenBank) hep_Hag family protein
KO
K21449
trimeric autotransporter adhesin
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcp02000
]
LC55x_4822
Transporters [BR:
lcp02000
]
Other transporters
Pores ion channels [TC:
1
]
LC55x_4822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_stalk
YadA_head
YadA_anchor
ESPR
DUF7310
Motif
Other DBs
NCBI-ProteinID:
ALN88070
LinkDB
All DBs
Position
complement(5328843..5335076)
Genome browser
AA seq
2077 aa
AA seq
DB search
MNKIYSVVWSRSLGQLVVASELAGGGGKASRGRRKAARSAASLSAGVMTALLAMGATGWV
PLAQAQVNCATAPYNYYSGSAMCAGFQSQATAGGATAVGYSASSTGLNATAVGYQAIAGA
TNSIYLGARTAPGTGATGESAIAIGTDVTASGSGGIGIGVQSSASGLSGVAVGVRAAAAA
EGAVAMGSGAASSAFNGVSVGAGATATGVNSIYLGARTGAGTGALAESAIALGTDVEASS
SRTVAIGFQARAVGNQSIAFGQGALAGVVGTPAVPNAIAIGVNSRSLANSTVAVGTAANA
SADGGAAVGNTAAASGINSSALGSGTVASATNATAVGASANVTGVGASAVGSFANASGGN
SAAIGSGANASGVNTFAGGRLATATNDAATALGNAARADGNSSLALGAQAIATGTSTVAV
GQGAGAGSTTANTGSVAMGVAAGTLVSGAQNSAVGGGVASAMRGAGSGVTGTRNVAFGTG
DGTVAYDATLDAAAGSLVSGNDNIAIGTNAGIGVASNATTSIGLNANASVGNAIALGTQA
NASALDAIAQGSSANAGGRNAIAIGFQSIASAINSINLGARTLVGSGALSAGSIAIGTDV
TASQDRAVAMGIVSRATGADAVAVGTRTTAAAEYATALGSGGSSAATAVRATGIGSIAVG
GNAALGALASGANAIAIGGESVADADDAVAIGRGSTATGGRAVAVGSGNFASGNGAVAIG
DPNTATGNGAVAQGLDNTATGNGSIGIGNTNMVGGGGQAVGVAGTAAQGAVGIGFQNTVV
GQGSVAIGSTSSALAAGAVAFGDTAVANNARDVALGSGSTTAAAVATPSATINGTTYNFA
GVAPTSTVSVGTVGTERTITNVAAGRISDTSTDAINGSQLYATNQAIESVATTANAGWNV
SAQGANASNVAPGESVDLNNTDGNIVVSKTAASDNVSFDLADDITVNSVTAGNTVVNGNG
LTITGGPSVTTSGINAGGLVINNVAPGVAGTDAVNVSQLTDATDAVRTHYYSVNDNGVVG
GNYNNDGATGVNAIASGVNATATGVASYAAGFGATASQDNGVAIGTNAQAITGGLVALGI
NSLSSAQNTIAIGVGATANVRLGIAVGGASLAGGNGAVAIGDTSRATDAYAVALGMVSTA
TGSQAVAIGHFADATATSALAAGYDANATGQYSTALGRLSSASAESALAIGNTANASATG
AVAVGLNAAASGVNAIAIGANASATGSVAMGASTRAGNGGAAFGDGANATYNGGVIDPAL
VAGAALGRNAIADVSGATALGSNTSVTAVDGVALGRGSVASTAAGVAGYDPITGLPSTDT
SPTWRSTLGAVSIGNGTDTRQITGVAAGAQDTDAVNVAQLTAAARAATTHYYSVNDNGVV
GGNYDNDGASGVNALAAGVGASATVASGTAVGNGAIAGTQAGDVALGSGSITGAVVATSS
DIIDGVTYNYAGTTPTSTVSVGAVGAERTITNVAAGRVSGGSTDAINGSQLFSTNQAVSA
LGVNLDQLGNSTAASLGGTSVYDPTTHTLTAGLAVGGNSYTNVQDALTQVNNNATAGWNI
TAGANSGNIAPNETLTVAAGSNATVAYDDATGTLTVGVVPDPSFNSVVIGNTTITTNGLT
IAGGPSITNVGINAGGTTITNVAAGVNGSDAVNLDQLNQAVSSGTAHYYSVNDGGVQGGN
YANNGATATGAIASGVNASATAADAVAIGTGATAGDANSVALGAGSTTSAAVGTASATIA
GTTYNFAGAAPVGTVSVGGVGAERTLTNVAAGRLSETSTDAVNGSQLHATNQAVNALDGR
VTNVEGDIANLSGTVNSFDGRITQVEGNVANLTNTVNTFDGRITSVQNGSDGMFQVSQEG
SIVKPQPTGTNSSAGGNGAVASGNNALAVGNQSTASGAGSTAVGTGATASHANSVALGSG
SATTVGAQSGYNAAYVGNSSSTGEVNIGGRTITGVAPGIAGTDAVNVSQLNAGVSSAVDQ
SKAYTDARFQKFDNDVWALRRDFRAGTSSAMAMAGLPQAYLPGKSMLALAAGGYQGEYGM
AVGLSGITENGRWVYKAQASGNTARDWGFSVGAGIQW
NT seq
6234 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaatctatagcgttgtatggagccgatcgctcggtcagctggtggtcgcgtcc
gagttggccggaggcggcggcaaggcatcgcgcggccggcgcaaggccgcgcgatcggcc
gcgagtctgagcgcgggcgtcatgaccgcgttgctggcgatgggcgcaacgggatgggtg
cctttagcgcaggcgcaggtgaactgcgccacggcgccgtacaactactacagcggcagc
gcgatgtgcgcgggttttcagtcccaggcgaccgcgggcggagccaccgccgtcggctat
agcgccagcagcacggggctgaatgccacggctgtcggctaccaagccattgccggcgcg
accaattccatttacctgggcgcgcgcaccgctccaggaaccggagcgaccggggaatcg
gcgatcgctatcggtacggatgtcaccgcaagcggctcgggcggcatcggtatcggcgtg
cagtcgagtgcctccggacttagcggcgtcgccgtgggcgtgcgagcggctgccgcagcg
gagggcgcggtcgcgatgggcagcggcgctgccagttcggcattcaatggcgtatctgtt
ggcgccggagccactgccaccggagtcaattccatttatctgggcgctcgcaccggcgct
ggaaccggcgcgttggccgaaagcgccatcgccctcggcacggacgtggaggccagctcc
agcaggaccgtggccatcggctttcaagccagggcggtgggcaaccaatccatcgcattc
ggccagggcgcgctcgcgggcgttgtcggcactccggcggtacccaacgccatcgcgatc
ggcgtcaactcgcgttctctcgccaattccactgttgcggtaggcactgccgccaatgcc
agcgccgatggtggcgcggccgtcggcaacactgcggccgccagcgggatcaattccagc
gcgctcggcagtggcacggtcgcgagcgccaccaatgcgaccgcggtgggcgcgtcggcc
aatgtcaccggagtcggcgccagcgccgtgggttctttcgccaatgccagcggcggcaat
tccgccgcgatcggctctggcgccaatgccagcggcgtcaataccttcgccggcggccgg
ttggcgacggcaaccaacgacgcagccaccgcgctcggcaacgccgctcgtgcggacggg
aacagttcgcttgcgcttggagcgcaggcgatcgctacgggaaccagcaccgtcgcggtc
ggccagggcgccggcgcgggctcgaccaccgccaataccggctcggtcgcaatgggtgtc
gccgccggcacgctggtcagcggcgcgcagaacagcgccgtgggtggaggcgtcgcgagc
gcgatgcgcggcgcgggttcgggcgttaccggaacgcgcaacgtcgccttcggcacgggc
gacggcacggtcgcctacgatgccaccctggatgccgcggccggcagcctggtcagcggc
aacgacaatatcgccatcggcaccaacgcgggcatcggcgtggcgagcaacgcgaccacg
tcgatcggcctgaacgcgaatgcgagcgtgggcaacgcgatcgccctgggtacccaggcg
aacgcttcggcgctggatgccatcgcgcaaggcagcagcgccaacgcgggcggccgcaac
gccatcgccatcggcttccagtcgatcgcgtcggcgatcaattcgatcaatctgggcgcg
cgcacgttggtcggatcgggcgccctgtcggcgggttccatcgccatcggcaccgacgtg
accgcttcgcaggatcgcgccgtcgcaatgggcatcgtgagccgcgcaaccggcgcggac
gcggtggcggtcggcacccggaccaccgcggcggccgaatacgcgacagcgctcggctcg
ggcggcagcagcgcggccacggcggtgcgcgccaccggcatcggttcgatcgccgtcggc
ggcaatgctgccctgggcgcgctcgcatcgggcgccaacgccatcgccatcggcggtgaa
tccgtcgccgatgccgatgacgccgtcgccatcggccgcggctccaccgccaccggcggt
cgcgcggtcgcggtcggttcgggcaacttcgccagcggcaacggcgcggtcgcaatcggc
gatccgaataccgccaccggcaacggcgcggtggcgcaaggtctggacaacaccgctacc
ggcaacggctcgatcggtatcggcaacaccaacatggtcggcggcggcggtcaggcggtc
ggcgtggccggcacggcggcgcagggcgcggtcggcatcggcttccagaacaccgtggtc
ggccagggcagcgtcgccatcggcagcaccagcagcgcgctggcggccggcgcggtcgcg
ttcggcgacaccgcggtggccaacaatgcgcgcgatgttgcgctgggttcgggttcgacg
accgcggcggccgttgcgacgcccagcgcgacgatcaacggcacgacctataacttcgcc
ggcgtcgcgccgaccagcaccgtcagcgtcggcaccgtcggcaccgagcggaccatcacc
aacgtggcggcgggacggatttccgatacgtccaccgatgcgatcaacggttcgcagctg
tatgcgaccaatcaggcgatcgaatcggtcgccaccaccgccaacgcgggctggaacgtc
agcgcgcagggcgccaacgccagcaacgtggcgccgggcgagtccgtcgacctcaacaac
accgacggcaatatcgtggtcagcaagaccgcggccagcgacaacgtcagcttcgatctg
gccgacgacatcaccgtcaacagcgtcaccgccggcaacaccgtggtgaacggcaatggc
ctgaccatcaccggcggaccgagcgtcaccacttccggcatcaacgctggcggcctggtc
atcaacaacgtcgcgccgggcgtggccggcaccgatgcggtcaatgtcagtcagctgacc
gacgccaccgacgcggtgcgcacgcattactacagcgtcaacgacaacggcgtggtcggc
ggcaactacaacaacgacggcgccaccggcgtgaatgcgatcgcgtcgggcgtgaacgcc
accgcgaccggcgtggcttcgtatgccgccggcttcggcgcgaccgcgagccaggacaac
ggcgtcgccatcggcaccaacgcccaggcgatcaccggcggcttggtggcgctgggcatc
aacagtctgtcctcggcccagaacaccatcgcgatcggtgtcggcgccaccgccaatgtc
cgcctgggcatcgccgtcggcggcgcgtccctggccggcggcaacggcgcggtggcgatc
ggcgatacgtcgcgcgcgaccgatgcctacgcggtcgcgctgggcatggtctcgaccgcg
accggcagccaggcggtggccatcggccacttcgccgatgcgaccgcgacctcggccctg
gccgccggttacgacgccaacgccaccggccagtattccaccgccttgggccgcttgagt
tcggcgtcggcggaaagcgcgctcgccatcggcaacaccgccaacgccagcgccaccggc
gcggtcgcggtgggattgaatgcggccgcgagcggggtcaacgccatcgcgatcggcgcc
aatgccagcgccaccggttcggtcgcgatgggcgcatcgacgcgcgccggcaacggcggc
gcggcgttcggcgacggcgccaacgcgacctacaacggcggcgtgatcgatccggcgctc
gtggccggcgcggcgttgggccgcaacgccatcgccgatgtgtccggcgccaccgcgctg
ggcagcaacacgtcggtgaccgccgtcgacggcgtggccctgggccgcggctcggtggcc
agcaccgccgccggcgtggccggttacgacccgatcaccggcctgccttccaccgatacc
tcgccgacttggcgcagcaccttgggcgcggtgagcatcggtaacggcaccgacacccgc
cagatcaccggcgtggcggcgggcgcgcaggacaccgatgcggtcaacgtggcgcagctg
accgcggcggcgcgggcggcgaccacgcattactacagcgtcaacgacaacggcgtcgtc
ggcggcaactacgacaacgacggcgcgagcggcgtcaacgccttggccgcgggcgtgggc
gccagcgcgacggtcgccagcggcacggccgtgggcaacggcgcgatcgcgggcacgcag
gccggcgatgtggcgctgggctcgggttcgatcaccggcgccgtcgtggcgacgagcagc
gacatcatcgacggcgtgacctacaactacgccgggaccacgccgaccagcacggtcagt
gtcggcgcggtcggcgccgaacgcaccatcaccaacgtcgccgcgggccgcgtatcgggc
ggttccaccgatgcgatcaacggttcgcagttgttctccaccaaccaggcggtgagcgcg
ctgggcgtcaatctggatcagttgggcaacagcaccgccgcatcgctgggcggtacctcg
gtctacgacccgaccacgcacacgctgaccgcggggctcgcggtgggcggcaacagctac
accaacgtgcaggacgcgctgacccaggtgaacaacaacgccaccgccggctggaacatc
accgccggcgccaacagcggcaacatcgcgcccaacgaaaccttgaccgtggccgcgggc
agcaacgccacggtcgcctacgacgacgccaccggcaccttgacggtcggcgtggtgccg
gacccgagcttcaacagcgtggtgatcggcaataccacgatcaccaccaacggcctgacc
atcgccggcggccccagcatcaccaatgtcggcatcaacgccggcggcaccaccatcacc
aacgtcgccgccggcgtcaacggcagcgatgcggtgaatctggatcagttgaatcaggcg
gtgtcctccggcaccgcgcattactacagcgtcaacgacggcggcgtgcagggcggcaac
tacgccaacaacggcgccaccgcgaccggcgcgatcgcttcgggcgtgaacgccagcgcc
accgccgccgatgcggtggcgatcggcaccggcgccaccgcgggcgacgccaacagcgtc
gcattgggcgcgggttccaccaccagcgcggcggtgggcaccgccagcgccaccatcgcc
ggcaccacctacaacttcgccggcgccgcgccggtgggaacggtgagcgtgggcggcgtg
ggcgccgaacgcaccctcaccaacgtcgccgcgggacgcttgtcggagacctcgaccgat
gcggtcaacggctcgcagctgcacgcgaccaaccaggcggtcaacgcgctggacggacgc
gtgaccaacgtcgaaggcgatatcgccaacctgagcggcacggtcaacagcttcgatggc
cgcatcacccaggtcgaaggcaacgtcgccaatctgaccaataccgtcaataccttcgac
ggccgcatcaccagcgtgcagaacggttccgacggcatgttccaggtcagccaggagggc
agcatcgtcaagccgcaaccgacgggcaccaactcgtcggccggcggcaacggcgcggtg
gccagcggcaacaacgcgctggcggtgggcaaccagagcaccgccagtggcgccggcagc
accgcggtgggtaccggcgcgacggcgagccatgccaacagcgtcgcgctgggttccgga
tcggcgaccacggtgggcgcgcagagcggttacaacgccgcctacgtgggcaacagcagc
tccaccggcgaggtcaacatcggcggccgcaccatcaccggcgtggcgcccggcatcgcc
ggcaccgacgcggtcaacgtcagccagctcaatgccggggtgagctccgcggtcgatcaa
tccaaggcctacaccgacgcgcgcttccagaaattcgataacgatgtgtgggcgctgcgc
cgcgacttccgcgccggcacgtcttcagcgatggcgatggcgggtctgccgcaggcctat
ctgccgggcaagagcatgctcgcgttggcggccggcggttatcagggcgaatacggcatg
gcggtgggcttgtcgggcatcaccgagaacggccgctgggtctacaaggcgcaggcgagc
ggaaacaccgcgcgcgactggggcttctcggtcggcgccggtatccagtggtga
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