Lysobacter capsici: LC55x_4851
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Entry
LC55x_4851 CDS
T04162
Name
(GenBank) carbohydrate binding module family protein
KO
K01179
endoglucanase [EC:
3.2.1.4
]
Organism
lcp
Lysobacter capsici
Pathway
lcp00500
Starch and sucrose metabolism
lcp01100
Metabolic pathways
lcp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
LC55x_4851
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LC55x_4851
Enzymes [BR:
lcp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.4 cellulase
LC55x_4851
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cellulase
CBM_6
CBM_35_2
Glyco_hydro_42
BiPBP_C
DUF4140
Cadherin-like
Motif
Other DBs
NCBI-ProteinID:
ALN88099
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All DBs
Position
5366247..5367977
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AA seq
576 aa
AA seq
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MNTRCAAALASVGLCVAMTLAPKAAQAEGFLRAQGQQIVDERNHPVILRGVGLGGWMLQE
GYMLGLSGPGMQHTIRQRIVDLIGEQDTQAFYNAWLDNYVSKDDIDTLAAWGFNSIRLPM
HYALYTLPVSKEPVPGQQTWLEDGFRRTDELIAWAKANGVYVILDLHAAPGGQGNDLNIS
DRDPSAPSLWDDAANRDKMVALWRKLAQRYRDEPAVAGYDIINEPNWGFASAKDKNGCEE
TGNAPLRELLVRTTAAIREVDTRHIVIIEGNCWGNNYRGVLDAGLWDDNLVLSFHKYWNG
TGRDSIKDHLALRARWNIPLWLGETGENSNDWFARTVETMEGEGIGWANWPVKKLRYNNP
LQVIANPGYERVLAYWEGKGPRPSREQAREALLTLANHDIRLHNNARHPDVVDAWLRAPR
DDRSLPFKRNAIAPGGGEVAAVDFDLGRNGVAYFDLTAANESGKPSGDWNRSQLYRNDGV
DLVRDGDGLRVAAMQNGEWLKYTIEVEAAGHYALTVRGTSGRVRMKVNGDALAPTEVNRS
QPVALPRGRNTLVVEAISGTPDLTSLQLQAVAGDAR
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgaacactcgctgcgccgccgcgctggcttcggttggtctgtgcgtggcgatgacgctc
gcgccgaaagcggctcaggccgaaggtttcctgcgcgcgcagggccagcagatcgtcgac
gaacgcaaccatccggtgattctgcgcggcgtcggcctgggcggctggatgctgcaggag
ggctatatgctgggcctgagcggtcccggcatgcagcacacgatccgccagcgcatcgtc
gatctgatcggcgagcaggacacgcaagcgttctacaacgcctggctggacaactacgtc
agcaaggacgacatcgacacgctcgcggcctggggtttcaactccatccgcctgccgatg
cattacgcgctctacaccctgccggtgtcgaaagagccggtgccgggccagcagacctgg
ctggaggacggctttcgtcgcaccgacgagctgatcgcctgggccaaggccaacggcgtg
tacgtgatcctggacttgcacgctgcgcccggcggacagggcaacgacctcaacatctcc
gatcgcgatccgtccgcgccctcgctgtgggacgacgccgccaaccgcgacaagatggtc
gcgctgtggcgcaagctggcccagcgttatcgcgacgaacccgcggtcgccggttacgac
atcatcaacgagcccaactggggcttcgccagcgccaaggacaagaacggctgcgaggaa
accggcaacgcgccgctgcgcgagctgctggtgcgcaccacggcggcgatccgcgaagtc
gacacgcgccacatcgtcatcatcgaaggcaactgctggggcaacaactaccgcggcgtg
ctcgatgccggtttgtgggacgacaacctcgtgttgagcttccacaaatactggaacggc
accggccgcgacagcatcaaggatcatctggccctgcgcgcgcgctggaacattccgctg
tggctcggcgagaccggcgagaactccaacgactggttcgctcgcacggtcgaaaccatg
gaaggcgaaggcatcggctgggccaactggccggtgaagaagctgcgctacaacaacccg
ctgcaggtgatcgccaacccgggctatgagcgggtgctggcgtattgggaaggcaagggc
ccgcggccgagccgcgaacaggcgcgcgaggcgctgctgaccctggccaaccacgacatc
cgcctgcacaacaacgcgcgccatcccgacgtggtcgatgcctggctgcgcgcgccgcgc
gacgaccgcagcctgccgttcaagcgcaatgcgatcgcgcccggcggcggcgaggtggcc
gcggtcgacttcgacctgggccgcaacggcgtggcctatttcgatctgaccgcggcgaac
gagagcggcaagccgagcggcgactggaaccggtcgcagttgtatcgcaacgacggcgtg
gatctggttcgcgacggcgacggcctgcgcgtggccgcgatgcagaacggcgaatggctc
aagtacacgatcgaggtcgaggccgccggccactacgcgttgacggtgcgcggcacgagc
ggccgggtgcggatgaaggtcaacggcgacgcattggcgccgaccgaggtgaatcgatcg
cagccggtggcgctgccgcgcggccgcaacacgctggtggtcgaggcgatatcgggcacg
cctgacctcacatcgctgcaattgcaagccgttgcgggggacgctcgctga
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