Lysobacter capsici: LC55x_4948
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Entry
LC55x_4948 CDS
T04162
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
lcp
Lysobacter capsici
Pathway
lcp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LC55x_4948 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcp03400
]
LC55x_4948 (priA)
Enzymes [BR:
lcp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LC55x_4948 (priA)
DNA repair and recombination proteins [BR:
lcp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LC55x_4948 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
RecA_N
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ALN88195
LinkDB
All DBs
Position
5468978..5471224
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AA seq
748 aa
AA seq
DB search
MPEALFPPPSTVWRVALPLPLPRLFDYLPPAEPSAAGDPVGCRVRVPFGRRELIGVVVEV
GPPEAGTDPAALKAVAARLDPEPLLHGELLDSLRWLARYTHAPLGEVLATALPGPLRHGE
ALADTHAWAWRLTEAGATARERLRAGKPRRLADLLAEHDALDEDRLDELLEDWRSAARAL
AKREHAQRIAVPAAQRAPTPQPGPALNDEQQATTDSVLAAGGRFAAFLLDGVTGSGKTEV
YLHAIADCLARGKQALILVPEIGLTPQTLARFRARLGVPVHALHSGLSDGERARTWAAFA
RGQARVAVGTRSAVFLPLREPGLIVIDEEHDGSFKQLDGIRYHARDFALVRAKALDVPVL
LGSATPSLESLRNAQAGRYGHLQLKRRAGQAQPPRVRVLDVRKRPLEAGLSPELIERIGG
ELRAGGQVLVFKNRRGYAPVLLCHDCGWTAHCPRCSTPLKGTPMTVHGGGRRLQCHHCGT
RRPAPDACPDCGGLALQSQGAGTERIEESLAARFPDFPVLRIDRGSTQKRDALEQMLGEF
GTTPGVLVGTQMLAKGHDLPNLTLVAVVGIDEGLFSADFRAPEKLAQLLIQVAGRAGRAD
KPGEVMLQTHHPDHELLHTLLSGGYPAFAEVELAQREAAGFPPFAHMALIRAEAQEVEAA
NAFLAMARREFERVAGPRGRADTVLEVNGPVPAPMPRRAGYLRAQLILSAPERRPLHAAL
DAALPAIHAAPEARKVRWSLDVDPADLY
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaggccctgtttccaccgccgtcgaccgtctggcgggtcgcgttgccgctgccg
ttgccgcggctgttcgactacctgccgcccgccgaaccgagcgccgcgggcgacccggtc
ggctgccgggtgcgggtgccgttcgggcgccgcgaactgatcggcgtggtcgtcgaagtc
ggcccgcccgaggccggcaccgacccggccgcgctcaaggcggtcgccgcccggctcgac
cccgagccgctgctgcacggcgaactgctcgactcgctgcgctggctggcccgctacacc
cacgccccgctcggcgaagtcctggccaccgccctgcccggcccgctgcgccacggcgag
gcgctggccgacacccatgcctgggcctggcgcctgaccgaagccggcgccaccgcccgc
gaacgtctgcgcgccggcaagccgcgccggctcgccgacctgctggccgaacacgacgcg
ctcgacgaggaccgcctggacgaactgctagaggactggcgcagcgccgcgcgcgccctg
gccaagcgcgaacacgcgcagcggatcgcggtgccggccgcgcagcgcgcgccgacgccg
cagccaggcccggcgctcaacgacgaacagcaggcgacgaccgattcggtgctggccgcg
ggcggccgcttcgccgcgttcctgctcgacggggtcaccggcagcggcaagaccgaggtc
tacctgcacgcgatcgccgactgcctggcgcgcggcaagcaggcgctgatcctggtgccc
gagatcggcctgaccccgcagaccctggcccgcttccgcgcccgtctgggcgtgccggtg
catgcgctgcactcgggcctgagcgacggcgaacgcgcccgcacctgggccgcgttcgcg
cgcgggcaggcgcgggtcgcggtcggcacgcgctcggcggtgttcctgccgctgcgcgag
ccgggcctgatcgtgatcgacgaagaacacgacggcagcttcaagcagctcgacggcatc
cgctatcacgcccgcgacttcgccctggtccgggccaaggcgctggacgtgccggtgctg
ctcggcagcgccacgccgtcgctggaatcgctgcgcaacgcccaggccgggcgctacggc
catctgcaactcaaacgccgcgccggccaggcgcagccgccgcgggtacgcgtgctcgac
gtgcgcaagcgcccgctcgaagccggcctgtcgccggagctgatcgaacgcatcggcggc
gaactgcgcgccggcggccaggtgctggtgttcaagaaccggcgcggctacgccccggtg
ctgctgtgccacgactgcggctggaccgcgcactgcccgcgttgctcgaccccgctcaag
ggcacgccgatgaccgtgcatggcggcggccggcgcctgcaatgccatcactgcggcacc
cgccggccggcgccggacgcgtgtccggattgcggcgggctggccctgcaatcgcagggc
gcgggcaccgagcggatcgaggaatcgctggccgcgcggtttcccgattttccggtcctg
cgcatcgatcgcggcagcacccagaagcgcgatgcgctggaacagatgctcggcgaattc
ggcaccacgccgggcgtcctggtcggcacccagatgctcgccaagggccacgacctgccg
aacctgaccctggtcgcggtggtcggcatcgacgagggcttgttcagcgccgacttccgc
gcgccggaaaaactcgcgcagttgctgatccaggtcgccggccgcgccggccgcgccgac
aaacccggcgaggtgatgttgcagacccatcaccccgatcacgaactgctgcacaccctg
ctgtccggcggctatccggcgttcgccgaagtcgaactggcgcagcgcgaagccgccggg
tttccgccgttcgcgcacatggcgttgatccgcgccgaggcgcaggaagtcgaagcggcg
aacgcgttcctggcgatggcgcggcgcgagttcgaacgcgtcgccggaccgcgcggccgc
gcggacacagtgctggaagtcaacggcccggtgcccgcgccgatgccgcgccgcgccggt
tacctgcgcgcgcagctgatcctgtccgcgcccgaacgccgtccattgcacgcagcgctc
gacgccgcgctgccggcgatccacgccgccccggaagcgcgcaaggtgcgctggtcgctg
gatgtcgatccggccgatctgtactga
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