Lysobacter capsici: LC55x_5133
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Entry
LC55x_5133 CDS
T04162
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
lcp
Lysobacter capsici
Pathway
lcp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LC55x_5133 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcp03400
]
LC55x_5133 (xth)
Enzymes [BR:
lcp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LC55x_5133 (xth)
DNA repair and recombination proteins [BR:
lcp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LC55x_5133 (xth)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
ALN88380
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All DBs
Position
5711402..5712172
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AA seq
256 aa
AA seq
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MKIVSWNVNSLNVRLPHLEQWLAGFAPDIVALQETKLEDPRFPDTALSAAGYRSVFAGQK
TYNGVAIVSRENAQDVQIGIPGFDDEQKRVIAATVGGLRIVNLYVVNGQDVGTDKYAYKL
RWLDAVHAWIEQEIRQYPDLIVLGDFNIAPEARDTHDPAVWNEDHILTSTAERDALQRLL
SLGLHDAYRLHNQEEGQFSWWDYRQAGFRRNLGLRIDLTLISESLRGRCVAAGIDREPRT
WDRPSDHAPAWVELAG
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgtcagctggaacgtcaactccctcaacgtgcgcctgccgcacctggaacag
tggctggccgggttcgcgccggacatcgtcgcgctgcaggaaaccaagctcgaggacccg
cgctttcccgataccgcgctcagcgcggccggttatcgcagcgtgttcgccgggcagaag
acctacaacggcgtcgccatcgtctcgcgcgagaacgcgcaggacgtgcagatcggcatc
cccgggttcgacgacgagcaaaagcgcgtgatcgccgccaccgtcggcggcctgcgcatc
gtcaacctgtacgtggtcaacggccaggacgtgggcaccgacaaatacgcctacaagctg
cgctggctggacgcggtgcatgcgtggatcgaacaggaaatccgccagtatccggacctg
atcgtgctcggcgatttcaacattgccccggaagcgcgcgacacccacgacccggcggtg
tggaacgaggaccatatcctgacctcgaccgccgaacgcgacgccttgcagcgcttgctg
tcgctcgggctgcacgacgcctatcgattgcacaatcaggaagaaggccagttctcgtgg
tgggattaccgccaggccggcttccgccgcaacctgggcctgcgcatcgacctgaccctg
atttccgaatcgctgcgcggccgctgcgtggccgcgggtatcgaccgagagccgcgcacc
tgggatcggccgagcgatcatgcgccggcttgggtggagttggcggggtga
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