Lysobacter capsici: LC55x_5141
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Entry
LC55x_5141 CDS
T04162
Name
(GenBank) polysaccharide biosynthesis family protein
KO
K08679
UDP-glucuronate 4-epimerase [EC:
5.1.3.6
]
Organism
lcp
Lysobacter capsici
Pathway
lcp00053
Ascorbate and aldarate metabolism
lcp00520
Amino sugar and nucleotide sugar metabolism
lcp01100
Metabolic pathways
lcp01240
Biosynthesis of cofactors
lcp01250
Biosynthesis of nucleotide sugars
Module
lcp_M00999
UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
LC55x_5141
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
LC55x_5141
Enzymes [BR:
lcp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.6 UDP-glucuronate 4-epimerase
LC55x_5141
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
KR
NAD_binding_10
adh_short_C2
UCR_Fe-S_N
Motif
Other DBs
NCBI-ProteinID:
ALN88388
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Position
5719353..5720318
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AA seq
321 aa
AA seq
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MTLLVTGAAGFIGANVCRALRAQGRDVVGLDNYNDYYDPQLKRDRVQALCADVDIRALDL
GDRDGLAALFDEFAFDRVVHLAAQAGVRYSLSNPHAYVDSNLVGFVNLLELCRHRGVQHL
AYASSSSVYGDSAKPPFSEDQRIDQPRSLYAATKAANELMAHTYAHLYGLRSTGLRFFTV
YGPWGRPDMAPLLFSRAVLAGRPIDVFNHGKMRRDFTYIDDIVAGVIGALDHPPEQEPPH
RVFNLGNHTPVELERFIQVIADAAGRPAEKIYKPMQPGDMIETMADTSRAQAAFGFEPAT
AIEQGLPRVVAWCRDYFGDDA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgctagtcaccggcgcggccggcttcatcggcgcgaacgtctgccgcgccctg
cgcgcgcagggtcgcgatgtcgtcggcctcgacaattacaacgattactacgacccccag
ctcaagcgcgatcgcgtgcaggcgctgtgcgcggacgtggacatccgcgcgctcgacctg
ggcgaccgcgacggcctggccgcgctgttcgacgaattcgccttcgaccgggtcgtccac
ctggccgcgcaggccggcgtgcgctattcgctgagcaacccgcatgcctacgtcgacagc
aacctggtcggcttcgtcaacctgctcgagctgtgccgccatcgcggcgtgcagcatctg
gcctatgccagttcctcgtcggtgtacggcgactcggccaaaccgccgttctcggaagac
cagcgcatcgaccagccgcgctcgctgtacgcggcgaccaaggccgccaacgaactgatg
gcgcacacctacgcgcacctgtacggcctgcgttcgaccggtctgcgcttcttcaccgtc
tacggcccctggggccggccggacatggcgccgctgctgttctcgcgcgcggtgctcgcc
ggccgcccgatcgacgtgttcaaccacggcaagatgcgccgcgacttcacctacatcgac
gacatcgtcgccggggtgatcggcgcgttggaccatccgcccgagcaggaaccgccgcac
cgggtgttcaacctgggcaaccacaccccggtcgagctggaacgcttcatccaggtcatc
gccgacgccgccggccgcccggccgaaaagatctacaagccgatgcagcccggcgacatg
atcgagaccatggccgacacctcgcgcgcccaggccgcattcgggttcgaaccggcgacc
gcgatcgaacagggcctgccgcgggtggtcgcgtggtgccgcgactatttcggcgacgat
gcctga
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