Lysobacter capsici: LC55x_5169
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Entry
LC55x_5169 CDS
T04162
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lcp
Lysobacter capsici
Pathway
lcp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LC55x_5169 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcp03400
]
LC55x_5169 (mutM)
Enzymes [BR:
lcp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LC55x_5169 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LC55x_5169 (mutM)
DNA repair and recombination proteins [BR:
lcp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LC55x_5169 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF6011
Zn_Tnp_IS1595
Motif
Other DBs
NCBI-ProteinID:
ALN88416
UniProt:
A0A0S2FYC8
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All DBs
Position
5747825..5748637
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AA seq
270 aa
AA seq
DB search
MPELPEVETTRRGLAPHLEGRRVVTAILRRPDLRWPIPLAIEDTLPGQRIDAVRRRAKYL
LLDTAAGSALLHLGMSGSLRVLPADTPVRAHDHVDLLLDSDHVLRFNDPRRFGCLLWQAP
GETHELLRDLGPEPLSDDFDGDYLFELSRGRKAPVKTFLMDQKVVVGVGNIYAAEALFAA
GVSPLRAAGKVARERYVQLAESIKTILGYAIQRGGTTLRDFISPDGAPGYFEQELAAYGR
GGEPCPRCGRPLKQASIGQRTTVWCGHCQR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaagtcgaaaccacccgacgcgggctcgccccgcacctggaaggc
cgccgcgtggtcaccgcgatcctgcgccggcccgacctgcgctggccgatcccgctggcg
atcgaggacaccctgcccggccagcgcatcgacgcggtgcgccgccgcgccaagtacctg
ttgctcgacaccgccgccggcagcgcgctgctgcatctgggcatgtccggcagcctgcgg
gtgttgccggccgacacgccggtgcgcgcgcacgatcacgtcgacctgctgctcgattcc
gatcacgtgctgcgcttcaacgatccgcgccgcttcggctgcctgctgtggcaagcgccc
ggcgaaacccacgaattgctgcgcgacctcggccccgagcccttgtcggacgacttcgac
ggcgactatctgttcgaactcagccgcggccgcaaggcgccggtcaagacatttttgatg
gatcagaaagtcgtggtcggcgtcggcaacatttatgccgccgaagcgttgttcgccgcc
ggcgtgtcgccgttgcgcgccgccggcaaggtcgcgcgcgagcgttacgtacaactcgcc
gaatcgatcaagaccatcctgggctacgcgatccagcgcggcggcacgaccttgcgcgac
ttcatcagccccgacggcgcgccgggctatttcgaacaggaactggccgcctacggacgc
ggcggcgaaccctgcccgcgctgcggccggccgctcaagcaggccagcatcggccagcgc
acgacggtgtggtgcgggcactgccagcgttga
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