Lysobacter capsici: LC55x_5174
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Entry
LC55x_5174 CDS
T04162
Name
(GenBank) hypothetical protein
KO
K09800
translocation and assembly module TamB
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcp02000
]
LC55x_5174
Transporters [BR:
lcp02000
]
Other transporters
Pores ion channels [TC:
1
]
LC55x_5174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
DUF748
Motif
Other DBs
NCBI-ProteinID:
ALN88421
LinkDB
All DBs
Position
complement(5753241..5757131)
Genome browser
AA seq
1296 aa
AA seq
DB search
MSDTPKTPEELRVEALIERRRRRRAAAKRWAWRSSLAAGVLTLLIAFAIYWLISTVAGRD
VLLAQIVARLPADSTFTWKSAEGPVAGPLTLRDVRFAYKDTLFTAERIYLEPALRPLLGR
KLRVDALQVDNATLSIAKSDEPFELPRWPEVLPQIEPPLALQADDVRIDGFRLSQGGEHL
IDVRHLRAGLDAQSGKLHVQKLDADSDRGHFTLHGDYEPRNDFKTDLLATAVLPSAPGRT
PPRLGLVARGDLSRMDVAVAGAAPGPVRVTLTLRGKDNPNWKLHARSDALDIGLLTSPRA
TPSETPMALRFDAAGVGGNADLDGEFRQGDLDIKVLPSKLSLKNQVLDVQPLALQLFDGT
ATLRGHADFTDADNGQFKFSINARGLTWGGKAAPTTLKSVAKPSQVAQTPDTPAVTLETA
DLGFAGTVKAWAAIGTASLLRDKQRATVEFDGRGNDQRMTLNTLKAKMPTGALDGQGEVA
WAPSLGWDFKATLSGFDPGYFAPEFKGAIDGKLASTGATRADGGLEIKASADQLGGRLRD
RPLGGRGNFVMHGAATGKSDDAFEGDVALSLGGSRIDAKGKYAQAIDLDAKFAPLQLNDL
LPSAAGSVNGTLKLSGARTAPNIDADLTGSGLKYGDYKAASFSAKGRLPWQGRGGELAVR
ASELDVGLALSSLNIDARGAIESLQLQAQARSEVANLDLSGNLDKRGATWQGALASLQLA
PSKGASWRLQQPAQFRWDGRNGALSNACLASSSGGSLCASADWPRRGVDLKGQGLPLLLA
QAYLPERADKRPWVLRGQIALDGELRPVGNGWRGQFNVSSAGGGLKFSERARRELLRYNE
LSLKASFDPNKLNAELKAGFNDDGRIDATVATGWDAFAPLSGTVAVNTDELTWVELFSPD
IVEPKGKLEGRITLGGTRSKPLLGGQARLSQFTTEVPSLGIVLQDGDVRLDAQPDGSARI
AGSLRSGEGTLNIDGSLGWQGDDTPLVLNLRGTNVLASDTRDLRAIANPELTVRYAAKQP
LNVTGKVTIPSARIDLERLDQGVSVSEDVVVLDPVNPEDTGSSPLELDLTLAVGDEVRLN
GFGLEGKLGGQMRVRSRPGREMTANGALNIEGRYTAYGQKLQITRGNLNWNNGPVSDPIL
DVRAEREVGAVKAGVDISGRVSSPQVNVWSDPASSQSEALAYLALGRPLSSVSGDENKQL
NAASAALSAGGGLIASQLGAKIGLDDAGVMESRALGGSVLGVGKYLSPRLYVGYGVSLLG
TGQVLTLKYLLRKGFDIEVESSTLENRASINWRKEK
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatacgccgaaaacacccgaggaactgcgcgtcgaggcgctgatcgaacggcgt
cgccgtcgtcgcgccgcggccaagcgctgggcctggcgcagcagtctggcggccggcgtg
ctgaccttgctgatcgcgttcgcgatctactggctgatctccaccgtcgccggccgcgac
gtgctgctggcgcagatcgtcgcgcgcctgccggccgattccaccttcacctggaagtcc
gccgaaggcccggtggccggtccgctgaccctgcgcgacgtgcgtttcgcctacaaggac
acgctgttcacggccgaacgcatctatctggaaccggcgctgcgtccgctgctcggacgc
aagctgcgggtggacgcgctgcaggtcgacaacgcgaccttgtcgatcgccaagagcgat
gagcccttcgaactgccgcgctggcccgaggtgctgccgcagatcgaaccgccgctggcc
ttgcaggccgacgacgtgcgcatcgacggcttcaggctcagccagggcggcgagcatctg
atcgacgtgcgccatctgcgcgcgggactggatgcgcagtcgggcaagctgcatgtccag
aagctcgacgccgacagcgaccgcggccatttcaccctgcacggcgattacgagccgcgc
aacgacttcaagaccgacctgctcgccaccgcggtgctgccgagcgcgcccgggcgcacg
ccgccgcggctggggctggtcgcgcgcggcgatctgtcgcgcatggacgtggcggtggcc
ggcgccgcgccgggtccggtgcgcgtgacgttgactctgcgcggcaaggacaatccgaac
tggaagctgcatgcgcgcagcgacgcgctcgacatcggcctgttgacctcgccgcgggcc
acgcccagcgaaacgccgatggcgctgcgtttcgacgcggccggcgtcggcggcaatgcc
gacctcgatggcgagttccgccagggcgatctcgacatcaaggtgctgccgtcgaagctg
tcgctgaaaaaccaggtgctcgacgtgcagccgctggcgctgcaattgttcgatggcacc
gcgactctgcgcggccacgccgatttcaccgatgccgacaacggccagttcaagttctcg
atcaacgcgcgcggcctgacctggggcggcaaagccgcgccgaccacgttgaagtcggtg
gccaagccctcgcaagtcgcgcagacgccggacacgccggcggtgacgctcgaaaccgcc
gatctcggcttcgccggcacggtcaaggcctgggccgcgatcggcaccgcgagcctgctg
cgcgacaagcagcgcgcgacggtcgaattcgacggccgcggcaacgatcagcgcatgacc
ctcaacacgctcaaggcgaagatgccgaccggcgcgctcgacggccaaggcgaagtcgcg
tgggcgccgtcgctgggttgggatttcaaggcgacgctgtcgggtttcgatccgggctat
ttcgcgcccgagttcaagggcgcgatcgacggcaagctcgccagcaccggcgccacccgc
gccgatggcggcctggagatcaaggccagcgccgatcaactcggcggtcgcctgcgcgat
cgtccgctcggcggacgcggcaatttcgtcatgcacggcgcggccaccggcaagagcgac
gacgcgttcgaaggcgacgtggcgctgagcctcggcggcagccgtatcgacgccaagggc
aagtacgcgcaggccatcgacctggacgccaaattcgcgccgctgcaactcaacgatctg
ctgccgagcgcggcgggcagcgtcaacggcacgctcaagctcagcggcgcgcgcaccgcg
ccgaacatcgacgccgacctgaccggcagtggcttgaagtacggcgattacaaggcagcg
agtttcagcgccaagggccgtctgccctggcagggccgcggcggcgaactggccgtgcgc
gccagcgagctcgatgtcggtctcgcgttgtcgtcgttgaacatcgatgcgcgcggcgcg
attgaatcgttgcaactgcaggcgcaggcgcgcagcgaagtggccaatctcgatctgtcc
ggtaatctcgacaagcgcggcgcgacctggcaaggcgcgctggcctcgttgcagctcgcg
ccgagcaagggcgcgtcgtggcgtctgcaacagccggcgcagttccgttgggacggacgc
aacggcgcgctgagcaacgcctgcctggcctcgagcagcggcggctcgttgtgcgcgagc
gcggactggccgcgccgcggcgtcgatctgaaaggccagggcctgccgttgttgctcgct
caggcctatctgcccgaacgcgccgacaagcggccgtgggtgttgcgtggacagatcgcg
ctcgacggcgaactgcgtccggtcggtaacggctggcgcggccagttcaatgtcagctcg
gccggcggcggcctgaaattcagcgaacgcgcgcggcgcgaattgctgcgttacaacgag
ctgtcgctcaaggccagtttcgatccgaacaagctcaacgccgaactcaaggccggcttc
aacgacgacggccgcatcgacgccaccgtcgccaccggctgggacgcgttcgcgccgttg
tcgggcacggtcgcggtcaacaccgacgagctgacctgggtcgagttgttctcgccggac
atcgtcgagcccaagggcaagctcgaaggccgcatcaccctgggcggcacgcgttcgaaa
ccgctgctcggcggccaggcgcgcctgtcgcagttcaccaccgaagtgccctcgctcggc
atcgtgctgcaggacggcgacgtgcgcctggacgcgcagcccgacggcagcgcgcgcatc
gccggcagcctgcgttcgggcgaaggtaccttgaacatcgacggcagcctgggctggcag
ggcgacgacacgccgctggtgttgaacctgcgcggcaccaacgtgctcgcttccgacacc
cgcgatctgcgcgctatcgccaatcccgaactgaccgtgcgttacgccgccaagcagccc
ttgaacgtgaccggcaaggtcacgattccgtcggcgcgcatcgacctggagcgtctggac
cagggcgtgtcggtgtccgaggacgtggtggtgctcgatccggtcaatccggaggacacc
ggcagttcgccgctggaactcgacctgaccctggcggtcggcgacgaggtcaggctcaac
ggcttcggcctggaaggaaaactcggcggacagatgcgcgtgcgttcgcgtccgggccgc
gagatgaccgccaacggcgcgctcaacatcgaaggccgctacaccgcgtacgggcagaag
ctgcagatcacccgcggcaatctcaactggaacaacggtccggtgtccgatccgatcctc
gacgtgcgcgccgagcgcgaagtcggcgcggtcaaggccggcgtcgacatcagcggtcgg
gtcagctcgccgcaggtcaacgtgtggtccgatccggccagttcgcagtccgaggccctg
gcgtatctggcgctcggccgcccgctgtcgtcggtcagcggcgacgagaacaagcagctc
aacgcggccagcgcggccttgtcggccggcggcggcctgatcgcttcgcagctcggcgcc
aagatcggcctggacgatgccggcgtgatggaaagccgcgcgctcggcggctcggtgctc
ggcgtcggcaagtacctgtcgccgcggttgtacgtcggctacggcgtgtcgttgctgggc
accggccaggtgctgaccttgaagtacctgctgcgcaagggcttcgatatcgaggtcgag
tcgagcacgctggagaatcgcgcgtcgatcaactggcgcaaggaaaaatag
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