Lysobacter capsici: LC55x_5175
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Entry
LC55x_5175 CDS
T04162
Name
(GenBank) surface antigen family protein
KO
K07278
translocation and assembly module TamA
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcp02000
]
LC55x_5175
Transporters [BR:
lcp02000
]
Other transporters
Pores ion channels [TC:
1
]
LC55x_5175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA_TamA_1
POTRA
Motif
Other DBs
NCBI-ProteinID:
ALN88422
LinkDB
All DBs
Position
complement(5757162..5759156)
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AA seq
664 aa
AA seq
DB search
MPVIFRLAFAAVSSFAIAGAAQAAQVSKVEIRGLDEAMTQNVRVSLSLVDTIGKDVSGRR
LGYLLREAENEAREALEPFGYYSPTIKVEDSRGTRRIATSEGTAPNAPAEGDRSAADAGA
AADTGADTRSAGNAAAGDSNTDPAATPPVDASAQAAPARAASPPITVTITIDKGEPVKVR
RSDVAILGAGSDDRYLKQDLAAFKPGPDQVFEHAAYEASKTKISRRLAERGYFDADFTSR
RVAVTRAEHAADIDLVWTSGQRYDMGPITFEQTPKRIIRESLLERLVYWEQGSYYHQRKL
DTFRESLARLDYFASIDIEPQPDQAVDGQVPVKVTLTPAKRSIYTAGLSYGTDSGAGVRL
GVERRYLNDRGHKALAQVDFAQRRKTATLQYRIPAFAWLDGWYTFSLQGTDEQTDYIDSR
RVELVASRSGKINQHWTATASLHGLRERWAYADEDDNDPTTPVDYRSATFLYPSLRAEYV
DADDRLYPRNGISATGMLRGGLEGAGSDANFLQAHLTARWYKGLGARSRLITRGELGHTF
TDALVDLPPSLRFYAGGDRSVRGYEWREVGPRIPAIPGRKAFALGAKNVITGSVEYEQYF
NDSWGGAVFVDSGSAFDDSPDMRTGVGVGVRWRSPVGPLRVDIARGLDNPDSGFQLYINI
GADL
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgccagtcatttttcgtctcgccttcgccgccgtttccagctttgccatcgctggggcg
gcgcaagccgctcaagtgagcaaggtggagatccgtggcctcgacgaggccatgacccag
aacgtccgcgtgtccttgtcgctggtcgatacgatcggcaaggacgtgtccgggcgccgc
ctgggctatctgctgcgcgaggccgagaacgaggcgcgcgaggcgctggaaccgttcggc
tattactcgccgacgatcaaggtcgaggattcgcgcggcacccgccggatcgcgaccagc
gaaggcaccgccccgaatgcgccggccgaaggcgatcgttccgccgccgatgcgggcgcc
gcggccgacaccggcgccgatacgcgcagcgccggcaacgcggccgccggcgacagcaac
acggatccagccgcgaccccgcccgtcgatgcgtccgcgcaagccgcgccggcgcgcgcc
gcgtcgccgccgatcaccgtgaccatcaccatcgacaagggcgagccggtcaaggtgcgc
cgttccgatgtcgccatcctcggcgccggcagcgacgaccgttacctcaagcaggacctc
gccgcgttcaagccgggcccggaccaggtgttcgagcacgcggcctacgaggccagcaag
accaagatcagccggcgactggccgaacgcggttacttcgatgccgatttcacttcgcgc
cgggtggcggtgacgcgcgccgaacatgccgccgacatcgacctcgtctggaccagcggc
cagcgttacgacatgggcccgatcaccttcgagcagacgcccaagcggatcatccgcgag
agtctgctcgagcggctggtgtactgggagcagggcagctactaccaccagcgcaagctc
gatacgtttcgcgagtcgctggcgcggctggattatttcgccagcatcgacatcgaaccg
cagccggatcaggctgtcgacggccaggtgccggtcaaggtcaccctgaccccggccaag
cgcagcatctacaccgccggcctgagctacggcaccgacagcggcgccggcgtgcgcctg
ggcgtggagcggcgttacctcaacgaccgcggccacaaggcgctggcgcaggtggatttc
gcccagcgccgcaagaccgcgaccttgcagtaccgaatccccgcattcgcctggctcgac
ggctggtacaccttcagcctgcagggcaccgacgagcagaccgattacatcgattcgcgc
cgggtcgaactggtcgccagccgcagcggcaagatcaaccagcactggaccgcgaccgcc
tcgctgcacggcctgcgcgagcgctgggcctatgccgacgaggacgacaacgatccgacc
acgccggtcgactatcgcagcgcgaccttcctgtatccctcgctgcgcgcggagtacgtc
gacgccgacgaccggctgtatccgcgcaacggcatcagcgccaccggcatgctgcgcggc
ggcctcgagggcgccggctcggacgcgaatttcctccaggcccacctcaccgcgcgctgg
tacaagggcctgggcgcgcgcagccgcttgatcacccgcggcgaactcggccacaccttc
accgacgcgctggtcgacctgccgccgtcgctgcgcttctacgccggcggcgaccgcagc
gtgcgcggctacgagtggcgcgaagtgggaccgcgcattcccgcgatcccgggccgcaag
gcgttcgcgctcggcgcgaagaacgtgatcaccggcagcgtcgaatacgagcagtacttc
aacgacagctggggcggcgcggtgttcgtcgacagcggcagcgccttcgacgacagcccg
gacatgcgcaccggcgtcggtgtcggcgtgcgctggcgttcgccggtcgggccgctgcgg
gtcgatatcgcgcgcggcctggacaatccggattcgggtttccagctctacatcaacatc
ggcgccgatctgtaa
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