Lysobacter capsici: LC55x_5225
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Entry
LC55x_5225 CDS
T04162
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
LC55x_5225
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
MZB
WHD_HRQ1
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ALN88472
LinkDB
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Position
5810416..5812905
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AA seq
829 aa
AA seq
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MSALIDPSSRDLVPSPAAARALARSDSEEAIDARHGGALAERLQRRYRDRITGSFTIPGR
EGRYAPLPEDLPESLKAALRARGIDRLYSHQAQAWDATQAGEHVAVVTPTASGKSLCYTL
PVVAAAMTRGAKALYLFPTKALAQDQVAELLELNRAGDLGVKAFTFDGDTPGDARQAIRL
HGDIVVSNPDMLHQAILPHHTKWAQFFENLRYIVIDEIHTYRGVFGSHVAGVLRRLQRIC
AFYGVTPQFILCSATIGNPKAHAEALIEQPVRAILDSGAPTGDKHVLLWNPPVVNADLGL
RASARSQSNRIARIAIKAGLKTLIFAQTRLMVEVLTKYLKDVFDHDPRKPARIRAYRGGY
LPSERREAERAMRDGRIDGIVSTSALELGVDIGSLDVVVLNGYPGSVAATWQRFGRAGRR
QQPSLGILIASSQPLDQYVVRHPDFFADASPEHARIAPDQPLILFDHIRCAAFELPFQHG
ENFGPIDPEVFLEALAETGVVHREGERWEWIADSYPANAVSLRSVADGNFVVVDRSDGRQ
VIIAEVDYSAAALTLYEGAIHMIQSVPYQVERLDWDGRKAYVTRTHVDYYTDSIDYTKLK
VLERFDGGEAGHGDSHHGEVHVVRRVAGYKKIRYYTHESIGYGPVNLPDQELHTTAVWWQ
LPQGVLLSRFGSKHEALDGFLGAAHALHIVATVAVMADARDLQKSVGNGDGAWFATQDAN
GRGQLRGGEHEAPLGGPVAMLEVQQFVPTVYLYDNFPGGVGLSEPLWLRQAELVVRALEL
VERCDCRAGCPACVGPVLAADEDREQATPRSLALQVLRLLSGHDDGDLA
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccctgatcgacccgtcctcgcgcgatctcgtcccctcgcccgccgcggcccgc
gcgctggcccgcagcgacagcgaggaagccatcgacgcccgccacggcggcgccctggcc
gagcgcctgcagcgccgctaccgcgaccgcatcaccggcagtttcaccattcccgggcgc
gaaggccgttacgcgccgctgcccgaggacctgcccgaatcactcaaggccgcgctgcgc
gcgcgcggcatcgaccgcctctacagccatcaggcgcaggcctgggacgcgacccaggcc
ggcgagcacgtcgccgtggtcaccccgaccgcctcgggcaaatcgctgtgctacaccctg
ccggtggtggccgcggcgatgacccgcggcgccaaggcgctgtacctgtttccgaccaag
gccctcgcccaggatcaggtcgccgagttgctggagctcaaccgcgccggcgacctgggg
gtcaaggccttcaccttcgacggcgacacccccggcgacgcgcgccaagcgatccgcctg
cacggcgacatcgtcgtgtccaaccccgacatgctgcatcaggcgatcctgccgcatcac
accaagtgggcgcagttcttcgagaacctgcgctacatcgtgatcgacgagatccacacc
taccgcggcgtgttcggcagccatgtcgccggggtgctgcgacggctgcagcggatctgc
gcgttctacggcgtcaccccgcaattcatcctgtgctcggcgacgatcggcaatcccaag
gcccacgccgaggcgctgatcgaacaaccggtacgcgcgatcctcgattcgggcgcgccg
accggcgacaagcacgtgctgctgtggaatccgccggtggtcaacgccgacctgggcctg
cgcgcgtccgcgcgctcgcagagcaaccggatcgcgcgcatcgcgatcaaggccgggttg
aagacgctgatcttcgcccagacccggctgatggtcgaagtgctgaccaagtacctcaag
gacgtattcgatcacgacccgcgcaagcccgcgcgcatccgcgcctaccgcggcggctat
ctgccgagcgagcgccgcgaggccgaacgcgcgatgcgcgacggccgcatcgacggcatc
gtctcgacttcggcgctggaactgggtgtggacatcggcagtctcgacgtggtcgtgctc
aacggctatccgggttcggtcgcggccacctggcagcgcttcggccgcgccggccggcgc
caacagccttcgctgggcatcctgatcgccagctcgcagccgctcgatcaatacgtcgtg
cggcatccggatttcttcgccgatgcctcgcccgaacatgcgcgcatcgcgcccgaccag
ccgctgatcctgttcgatcacatccgctgcgccgcgttcgaactgccgttccagcacggc
gagaacttcggcccgatcgatccggaagtgttcctggaagccctggccgaaaccggagtg
gtccatcgcgaaggcgagcgctgggaatggatcgccgacagctatccggccaacgcggtc
agcctgcgctcggtcgccgacggcaatttcgtcgtggtcgatcgcagcgacgggcgtcag
gtcatcatcgccgaagtcgattactcggccgccgcgctgaccctgtacgaaggcgcgatc
cacatgatccagtcggtgccgtatcaggtcgaacggctggattgggacggccgcaaggct
tacgtgacccgcacccacgtcgactactacaccgactcgatcgactacaccaagctcaag
gtgctcgaacgtttcgacggcggcgaggccggccacggcgacagccatcacggcgaagtg
catgtggtccggcgcgtggccggttacaagaagattcgttactacacccacgaaagcatc
ggctacggcccggtcaatctgcccgaccaggaactgcacacgaccgcggtgtggtggcag
ctgccgcagggcgtgctgctgtcgcgtttcggctccaagcacgaggcgctcgacgggttt
ctcggcgccgcgcatgcgctgcacatcgtcgccacggtcgcggtgatggccgatgcgcgc
gatctgcagaagtcggtcggcaacggcgacggcgcgtggttcgcgactcaggacgcgaac
ggtcgcggccagttgcgcggcggcgaacatgaggcgccgctcgggggcccggtggcgatg
ctggaagtgcagcagttcgtgccgaccgtgtacctgtacgacaacttccccggcggcgtg
ggcttgagcgaaccgctgtggctgcgccaggccgaactggtcgtccgcgcgctggaactg
gtcgaacgctgcgactgccgcgccggctgcccggcctgcgtcggcccggtgctggccgcc
gacgaagaccgcgaacaggcgacgccgcggtcgctggccttgcaggtgctgcgcttgttg
agtgggcacgacgacggcgacctcgcatga
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