Lysobacter capsici: LC55x_5254
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Entry
LC55x_5254 CDS
T04162
Name
(GenBank) conserved repeat domain protein
KO
K21449
trimeric autotransporter adhesin
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcp02000
]
LC55x_5254
Transporters [BR:
lcp02000
]
Other transporters
Pores ion channels [TC:
1
]
LC55x_5254
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CshA_NR2
SpaA_3
GEVED
CLIPPER
Motif
Other DBs
NCBI-ProteinID:
ALN88501
LinkDB
All DBs
Position
complement(5845395..5847395)
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AA seq
666 aa
AA seq
DB search
MLFAAMALAGLATALPQSAQAQFATGGAGRFRPNILWFDWGNNAANIPQAGTSVTNVFNV
SGQELRITCALSNINGGAAPSLRIYRPGGWSGDGLDDLYNVGGTGGSNTMDIGLRNRVDA
TTVNFNFACSATIGAPGQTNPPAFALDGLVVADAEQSAGSEYLQATIGTTNAGQPTTWRI
IDRFRTAGCTTGTPTTLTNNAGSSTLRFGASTNCASGPMGVAFMENATSAAVEFRGGGGS
AVALGVFIVDASDRGDAPASYGEPVHLSQFTWSGGTLTAGTTTDINASGFTLASLVPPST
RLGNALDSEANTPFSTNADGDDLVGTPDDEDAFAAPLGTIATLPGQTYTSPPVACTGPGT
VRGWIDFNRDGDFNDPGEVSSNSPTCTGTSTVALNWSVPAGVQAGLSYMRLRIASNAAQI
ATPIGTANDGEVEDHLLTLATARLTLVKQVAARADAADQFTVSLLQGANVLGSAATSGSG
NSASTAAVAVGAGTAYTLRDALTAGATPFARYLKSVACLANAGSSGAVPTPGAPSGSGPV
DWSLTPNAGNDLTCTITNRATLIALQISKDDGGQTTYTPGSTRNYVLTVRNTGPDPVLGA
QVNDPLPAGVTLTGAWSCSASVGSVCGAVSGGAAGGNSVSLIVDLLSGGSATITVPVVYS
ANPADY
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
gtgttgttcgccgcgatggcgctggccggcttggccaccgcgttgccgcaatcggcccag
gcgcagttcgcgaccggcggggcggggcggttccggcccaacatcctgtggttcgactgg
ggcaacaacgcggccaatatcccgcaggccggcacctcggtgaccaacgtgttcaacgtg
tccgggcaggagctgcggatcacttgcgcgctcagcaacatcaacggcggcgccgcgccg
tcgctgcgcatctaccgccccggcggctggagcggcgacggcctggacgatctgtacaac
gtcggcggcaccggcggctcgaacaccatggacatcggcctgcgcaatcgcgtcgacgcg
accacggtgaacttcaacttcgcctgttcggcgacgatcggcgcgccgggccagaccaat
ccgccggcgttcgcgctcgacgggttggtggtggccgacgccgagcaatcggcgggcagc
gagtacctgcaggccaccatcggcaccaccaatgccggccagccgaccacctggcgcatc
atcgatcgcttccgcaccgccggctgcaccaccggcacgccgaccacgctgaccaacaac
gccggttccagcaccttgcgcttcggcgcttcgaccaactgcgccagcggcccgatgggc
gtggccttcatggagaacgcgaccagcgcggcggtcgagttccgcggcggcggcggttcg
gcggtcgcgctgggcgtgttcatcgtcgacgccagcgatcgcggcgacgcgccggccagt
tacggggagccggtgcatctgtcgcagttcacctggagcggcggcacgctgaccgcgggc
acgaccaccgacatcaacgccagcggcttcaccctcgccagtctggtgccgccgagcacg
cgtctgggcaatgccctcgattcggaagccaatacgccgttctcgacgaatgccgatggc
gacgacctagtcggcacgccggacgacgaggacgcgttcgccgcgcccttgggcacgatc
gcgacgctgcccggtcagacctacacctcgccgccggtggcctgcaccggcccgggcacg
gtgcgcggctggatcgatttcaatcgcgacggcgatttcaacgatcccggcgaagtctcc
agcaacagcccgacctgcaccggaaccagcacggtcgcgctcaactggagcgtgccggcc
ggggtccaggccggcctgagttatatgcggctgcgcatcgccagcaacgcggctcagatc
gccacgccgatcggcaccgccaacgacggcgaggtcgaagaccacctgctgaccctggcc
acggcgcgcctcaccttggtcaagcaggtcgccgcgcgcgccgatgcggccgaccagttc
acggtcagcctgttgcagggcgccaacgtgctcggcagcgcggcgacctccggcagcggc
aacagcgccagcaccgcggcggtcgcggtcggcgcgggcactgcctacaccttgcgcgat
gcgctcactgccggcgccacgccgttcgcgcgctatctcaaatcggtcgcctgcctcgcc
aacgccggcagcagcggcgccgtgcccacgccgggcgcgccgagcggcagcggtccggtc
gactggagcctgaccccgaacgccggcaacgacctgacctgcaccatcaccaaccgcgcg
acgttgatcgcgttgcagatcagcaaggacgacggcggccagaccacttacacgcccggt
tccacccgcaactatgtgctgaccgtgcgcaataccggccccgacccggtgctcggcgcg
caggtgaacgatccgctgccggccggggtcacgctgaccggggcgtggagttgcagcgcc
agcgtcggttcggtctgcggggcggtgtccggtggcgcggccggcggcaacagcgtgagt
ttgatcgtggatctgctgtcgggcggttcggcgacgattacggtgccggtggtgtatagc
gcgaatcccgcggattactga
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