Lysobacter capsici: LC55x_5381
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Entry
LC55x_5381 CDS
T04162
Name
(GenBank) glycosyl transferase family, helical bundle domain protein
KO
K00758
thymidine phosphorylase [EC:
2.4.2.4
]
Organism
lcp
Lysobacter capsici
Pathway
lcp00240
Pyrimidine metabolism
lcp01100
Metabolic pathways
lcp01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LC55x_5381
Enzymes [BR:
lcp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.4 thymidine phosphorylase
LC55x_5381
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_3
Glycos_trans_3N
PYNP_C
Motif
Other DBs
NCBI-ProteinID:
ALN88627
LinkDB
All DBs
Position
complement(6027672..6029165)
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AA seq
497 aa
AA seq
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MPVRRAGIDTYRQPVLYLHRDCLVSCAEGFAALTRVKVECGDRDVVALLNIVTGDWLSKD
EAALSDAAWRVLAPKAGAIASFSHAEPPESASALRAKVFGKRLGEAEFESILRDALASRL
SDIELAAFVTTCAGDRMDLDESVALTRAMVSVGERIDWGTGPVLDKHCVGGLPGNRTTPI
VVPIVAALGHRIPKTSSRAITSPAGTADVMATMTEVDLEIDVLRTVVDREGGCMASGGNM
HLSPADDILIQIERPLDLDSDGQMVASILSKKVAAGCTHVLIDIPVGSTAKVRTMAAAEA
IARRLAFVGEAVGLRVGVLMSDGKQPVGRGIGPALEAHDVLEVLRNSPQAPGDLRERALD
VAGAVLELLPGIPRGSGRIQAAGVLASGAALRKFMAICAAQGGFREPGTAHFVEPVIARA
DGRVGCINNRQLARIAKLAGAPLNATAGVVCSLREGDLVQRGMPLFHVHAGSRGELDYAL
DYANTHLDALSLRSEPS
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
ttgccggtgcgtcgagccggtattgatacgtatcgccaacctgtcctgtacctgcacagg
gactgcctggtctcctgcgcggagggcttcgccgcgctgactcgggtcaaggtcgaatgc
ggtgatcgtgatgtggtcgccctgctgaacatagtgaccggcgactggctgagcaaggac
gaggcggcgctgtccgacgccgcctggcgagtgctcgcgccgaaggccggcgcgatcgcc
tcttttagtcacgccgagccgcccgaatcggccagcgcactgcgcgccaaggtgttcgga
aagcgcctgggtgaagccgaattcgagtcgatactgcgcgacgccctcgcatcgcggctt
tcggacatcgaattggcggccttcgtgacgacctgcgccggcgatcgcatggacctggac
gagtccgtcgctctgacacgcgcgatggtgtcggtcggcgagcggatcgactggggaacc
gggccggtattggacaagcattgcgtcggcggcttgcccggcaaccgtaccaccccaatc
gtcgtgccgatcgtcgcggcgttggggcatcgcattccgaagacatcgtcgcgcgccata
acctcgccggccggaaccgcagacgtcatggcgaccatgaccgaggtggaccttgagatc
gacgtgctgcgtaccgtggtggatcgcgagggtggctgtatggcgtcgggcggcaatatg
cacctgagtcccgccgacgatatcctgatccagatagagcggccgctggacttggacagc
gacgggcagatggtcgcgagcatcctgtcgaagaaagtcgccgccggctgcacccatgtg
ctcatcgacattccggtcggcagcaccgccaaggtgcgaaccatggcggccgccgaggcg
atcgcgcggcgcctggccttcgtcggcgaggccgtcggcttgcgcgtcggcgtgttgatg
tccgatggcaagcagccggtagggcgcggcattgggcccgcgctggaggcccatgatgtg
cttgaggtcctgcgtaattcgccgcaagcgcctggggacttgcgcgaacgggcgctcgat
gtggccggggcggtgctggaattgttgccgggcatcccccgcggtagcgggcgaattcag
gctgcgggagtgcttgcgtcgggtgcggcgctgaggaagttcatggcgatctgcgcggcg
cagggcggtttccgtgaacccgggacggctcactttgttgaacctgtcattgcgcgcgcc
gacggccgggtcggctgtatcaacaatcgacagctggcgcggatcgcaaagttagcgggc
gcaccgctcaacgcgaccgccggagtggtgtgcagtctgcgcgagggcgatcttgtccag
cgcggcatgccgttgtttcacgtgcatgccgggtccaggggtgagctggactatgcgctg
gactatgccaacactcacctcgacgccttgagcctgcggagcgagccgtcatga
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