Lysobacter capsici: LC55x_5430
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Entry
LC55x_5430 CDS
T04162
Name
(GenBank) bacterial regulatory helix-turn-helix, AraC family protein
Organism
lcp
Lysobacter capsici
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Rv2175c_wHTH
HTH_31
DUF2336
MarR_2
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
ALN88676
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Position
6093000..6094214
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AA seq
404 aa
AA seq
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MYHCLPSSKRTDPGIGRGDARLFSRPFAANARRRLAARSRLDKNRPFDASIMLSQHFLFF
FAMLGAFNGIGAASFLWWRAKGKPTQRWLSLLILAVSVRTGKSVAFYFWPDIPKIVLQLG
LTACFMIGPCLFFLLRSSQSDSPGLGRADRRHIAGLLVIAAAVNVLLPYAGHIDLWRQVV
APAITYSWLGYLLLATLQVYRHRARLSGTPSGPLLLGAVGGIWLIWIAYFTAGYTSYIVG
ALSFTFVLASSVVVYLRLRSGQTPIEPYQDRRIPQTEAAAQLQALAELMARERLHLDPGL
TLPRLARRLGMPQARLTQLLNDNNQTSFKQYLAQLRVGEAKTLLSREPSKPLEAIAEAAG
FQSMSTFYSAFKKVEGITPAAFRQRAQTPGIDSRSPENDSNALI
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
gtgtaccattgcctaccctcgtcgaagcgcacagacccgggcatcggtcgaggcgatgca
agactgttctcccgcccgttcgccgcaaacgcgcgtcgccggctcgccgcgcggtcgcga
ctcgataaaaaccgacctttcgatgcatcgatcatgctgagccagcatttcctgtttttc
ttcgcgatgctcggcgccttcaacgggatcggcgcggcgtcgttcctgtggtggcgggcc
aagggcaaacccacgcagcgctggctgtcgctgctgatcctggcggtcagcgtacgaacg
ggaaaatccgtggccttctatttttggcccgacattcccaagatcgttctccagctcggc
ctgaccgcctgcttcatgatcgggccctgcctgttctttctgctgcgctcaagccagagc
gatagccccggcctcgggcgggccgaccgtcggcatatcgccgggttgctggtcatcgcc
gcggccgtgaacgtgttgctgccctatgccggccatatcgacctgtggcgacaggtcgtc
gcgccggccatcacctactcgtggctgggctacctcctgcttgccaccttgcaggtgtac
cgccaccgcgcacggctttcggggacgccatcgggcccgctgttgctgggggcggtgggc
ggcatctggttgatctggatcgcctacttcaccgccggctacacctcctacatcgtcggc
gcgctgtcgtttaccttcgtcctggcttcgagcgtggtggtctatctgcgcctgcggtcc
ggccagaccccgatcgagccctatcaggatcgccgcattccccaaaccgaggccgccgcg
caattgcaggccctggccgagttgatggcgcgcgagcggctgcatctggaccccggattg
accctgccccgcctcgcgcgccggctcggcatgccccaggcccggctgacgcagttgctc
aacgacaacaaccagacctcgttcaaacagtacctggcgcaactgcgcgtcggcgaggcc
aagacgctcctgtcccgggagccttcgaagcctctcgaagcgatcgcggaagcggcgggc
ttccagtccatgtcgaccttctacagtgccttcaaaaaagtggaaggcatcacgccggcc
gcgttccggcagcgcgcccagactccgggaatcgactcccggagtcctgaaaatgattcc
aacgcattgatctga
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