Lysobacter capsici: LC55x_5547
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Entry
LC55x_5547 CDS
T04162
Name
(GenBank) tonB-dependent siderophore receptor family protein
KO
K16088
outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcp02000
]
LC55x_5547
Transporters [BR:
lcp02000
]
Other transporters
Pores ion channels [TC:
1
]
LC55x_5547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ALN88793
LinkDB
All DBs
Position
6199731..6201854
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AA seq
707 aa
AA seq
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MLGLGAIASASAQTSPERDATPPAAADPRTLETVEVTANQLGTVTEGSGAYTPGTIATAT
RLVLTPRQTPQSISVITRQEMDDFGLTGIDDVMRVTPGLSIVTYDSERTEYYARGFAVQN
FQYDGIPMQRDSAYSAGNTLSDMAIYDRVEVLKGATGLLTGMGDPGATINLIRKKPSRDA
VRGSATLGAGSWDDYRAEVDVGGPLTDDGRVRGRAVAAFQDGHAHSDHYQRSTQVLYGIV
EADLGESTLLSVGADAQDSDPKGSSWGGIPLLDSNGDFNDKPRSFNNGARWSHWRQYTRT
GFATLEHRFGNDWLVKLQLNHQVNGYDAALGAAASGNPDPLTGAGVGLWLGQYIGKTVSN
AADVYVSGRFDWFGREHELVVGGSLSRKRWTNTGYFAPADYPTDVPDYRAWNGDIPEPAW
QRGFGDNVVTRENGAYIVGRFDLADPLKLIVGSRIGSYKSVDIDKSGVVVPYAGVVYDLN
RNFSAFASYSTIFKPQSYQDERGRALDPLEGQNYEVGLKGEFYDGRLNASAAVFQLDQDN
YPDPTGGRTPSGGIAYRALPGVRTKGYEFEISGQLLPGWQIQAGYAHKLARQAGAKVSTL
EPEDQFSIHTSYRLRGGLQGWTIGGGARWQNQTFGSIPHPLLGTVEHRTQPYWLLDLMTR
YEINDQLSATLNVSNLLDKRYYTIFSYYSTYTWGEPRNVRVALTYRF
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgggctcggcgcgatcgctagcgccagcgcgcaaacgtcgcccgagcgcgacgcg
acgccgccggcagcggccgatccgcggacgctggaaaccgtcgaggtcaccgccaaccag
ctcggcaccgtcaccgaaggcagcggcgcctatacgcccggcaccatcgccaccgccacg
cgcctggtgctgacgccgcggcagaccccacagtcgatcagcgtgatcacccgccaggag
atggacgacttcggcctgaccgggatcgacgatgtcatgcgcgtcaccccgggcctgagc
atcgtcacctacgacagcgagcgcaccgagtactacgcgcgcggtttcgcggtgcagaac
ttccagtacgacggcatcccgatgcagcgcgattcggcctattcggccggcaacacgctc
agcgacatggcgatctacgaccgcgtcgaagtgctcaagggcgcgaccgggctgctgacc
ggcatgggcgatccgggcgcgaccatcaacctgatccgcaagaagccttcgcgcgacgcc
gtgcgcggcagcgccacgctcggcgccggttcgtgggacgactaccgcgccgaggtcgac
gtcggcggcccgctgacggacgacggacgcgtgcgcggccgcgcggtggccgcgttccag
gacggacacgcgcacagcgatcattaccagcgcagcacccaggtgctgtacggcatcgtc
gaggccgacctgggcgaatccaccttgctcagcgtcggcgccgacgcgcaggacagcgat
cccaagggttcgagctggggcggcatcccgctgctcgacagcaacggcgacttcaacgac
aagccgcgctcgttcaacaacggcgcgcgctggagccattggcgccagtacacgcgcacc
ggtttcgccacgctggagcatcgcttcggcaacgactggctcgtcaagctgcagctcaac
catcaggtcaacggctacgacgccgcgctcggcgccgccgcgtccggcaaccccgatccg
ctcaccggcgcgggcgtcggcctgtggctgggccagtacatcggcaagaccgtcagcaac
gccgccgacgtatacgtcagcggccgtttcgattggttcggccgcgaacacgaactggtg
gtcggcggcagcctgtcgcgcaagcgctggaccaacaccggttacttcgcgccggccgac
tatccgaccgacgtgcccgattaccgcgcatggaacggcgacatccccgagccggcctgg
cagcgcggcttcggcgacaacgtcgtgacccgcgagaacggcgcctacatcgtcggccgc
ttcgacctggccgacccgctcaagctcatcgtcggcagccgcatcggcagctacaagtcg
gtcgacatcgacaagagcggcgtggtggtgccgtacgccggcgtggtctacgacctgaac
cggaatttctccgcgttcgccagctacagcaccatcttcaagccgcagagctatcaggac
gaacgcggccgcgcgctggatccgctggagggacagaactacgaagtcggcctgaagggc
gagttctacgacggccgcctcaacgccagcgcggcggtgttccagctcgatcaggacaac
taccccgatccgaccggcggtcgcacgccgtcgggcggcatcgcctaccgcgccctgccc
ggcgtgcgcaccaagggttacgagttcgagatctcgggccagttgctgccgggttggcag
atccaggccggttacgcgcacaaactcgcgcgccaggccggcgccaaggtctcgaccctg
gaaccggaggatcaattcagcattcacaccagctaccgtctgcgcggcggtctgcagggc
tggaccatcggcggcggcgcgcgctggcagaaccagaccttcggctcgatcccgcatccg
ctgctgggcacggtcgagcaccgcacgcagccgtactggctgctcgacctgatgacccgc
tacgagatcaacgaccagctgtcggcgacgctcaacgtcagcaatctgctcgacaagcgc
tattacacgatcttcagctactacagcacctacacctggggcgaaccgcgcaacgtgcgc
gtggcgctgacctatcggttctga
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