Lysobacter capsici: LC55x_5584
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Entry
LC55x_5584 CDS
T04162
Name
(GenBank) tonB dependent receptor family protein
KO
K02014
iron complex outermembrane recepter protein
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcp02000
]
LC55x_5584
Transporters [BR:
lcp02000
]
Other transporters
Pores ion channels [TC:
1
]
LC55x_5584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ALN88830
LinkDB
All DBs
Position
complement(6233370..6236114)
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AA seq
914 aa
AA seq
DB search
MFFKRDPLAAAVGLLLCVGFVPSSFAQDSGAQPAAEQAGEQTTGQATTLDAVQVTGSHIK
RLQLSGVGPVTVLDAEAIQRSGATSVDTLLQRLPASAGFAGSQSNAYWAENGYGTSQVNL
RGLGINRTLVLLNGRRVVNGGTGANSSVDLNMIPVALIERIEVLKDGASAIYGADAVAGV
VNIITKKKYDGAEVAVRFGQTFENDGDDAAFDLVWGTHSERGSLMAGLSYSEGGTVNMAS
RAPCGLGEVDGRLQCVGSSTTIGGRALLADGRRINFNQVPGGDGNFYEPYSAAKHNYNGN
PTLNAVNPIKRISASMLGDMQLSDDLSLFTELMYTNRQSDQLAAPGGLGVYRPINIAANH
PTNPTGQNLLLQRRRLQEAGPREFFQETNTFRAVVGLEGRLGMNWDWSAAINWGRNTGTD
GSTKVANLDRVDNTLNPAICSNAPGAAIPCGDYLGYGDISQKVLDYILFTTRDHGGNEQK
SFTANLSGQLFELPAGWVGFASGIEVRKERGWRDPDPLTVLGIANTNQQDPIAGEYLAKE
AFAEFAVPLLQGRALAESLTLNLAVRYSDYDLFGEDINYKVGLDWQVVPSLKLRANYATA
FRIPNIPELFGGIAEGNLTTTDPCSGWASQPAGSQVRQNCQAYGVPAGYVQPGNTILTTS
GGNRNLEPEDARSLTLGAVWTPGFAPGLTLTADYFNIRIDNAIQRIDGSTKLAICYNTPG
LAHPFCGNENFTRNPITGEVDFLSSQPVNAADERVSGIDLGGLYEFEMAGFDSSFSLDVS
YLDKYDVRPFPGAEVIHYAGKITGGRGSYTHWRAFTSLTMSRDEWSGTYSLQYIGKADDI
NAARGDIGDHSPSVSYHNVQLKYSPVKSFDVSFGIDNLFDKKPPFIQSYTDANTDTMTYD
LLGRRWYARFGYRW
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcaagcgcgaccccctcgcggcggccgtcggcctgctgctgtgcgttggtttt
gttccgtcgtcgttcgcccaggacagcggcgcgcaaccggcggccgaacaggccggcgag
cagaccaccggccaggccaccacgctcgatgcggtccaggtcaccggcagccacatcaag
cggctgcaattgtccggcgtcggcccggtcaccgtgctcgacgccgaagcgatccagcgc
tccggcgcgacctcggtcgacaccttgctgcaacgcctgccggcctcggccggtttcgcc
ggcagccagtccaacgcgtactgggccgagaacggctacggcaccagtcaggtcaatctg
cgcggcctgggcatcaaccgcaccctggtgctgttgaacggccgccgcgtcgtcaacggc
ggcaccggcgccaacagctcggtggatctcaacatgatcccggtggcgttgatcgaacgc
atcgaagtgctcaaggacggcgcctcggcgatctacggcgccgacgcagtcgccggcgtg
gtcaacatcatcaccaagaaaaaatacgacggcgccgaggtggcggtgcgtttcggccag
accttcgagaacgacggcgacgatgccgcgttcgatctggtctggggcacccacagcgag
cgcggttcgctgatggcgggactgagttattccgaaggcggcacggtcaacatggcctcg
cgcgcgccgtgcggcctgggcgaagtcgacggccgtctgcagtgcgtcggcagttcgacc
acgatcggcggccgcgccttgctcgccgacggccggcggatcaatttcaaccaggtgccg
ggcggcgacggcaatttctacgaaccgtactcggccgccaagcacaactacaacggcaac
ccgaccctcaacgcggtcaatccgatcaagcgcatcagcgccagcatgctgggcgacatg
cagttgagcgacgacctgagtctgttcaccgagctgatgtacaccaaccggcagtcggac
cagctggcggcgccgggcggattgggcgtctaccgcccgatcaacattgcggccaatcac
ccgaccaacccgaccgggcagaacctgctgctgcaacgcagacgcctgcaggaagccggg
ccgcgcgagttcttccaggaaaccaacaccttccgcgcggtggtcgggctggaaggacgc
ctcggcatgaactgggattggtccgcggcgatcaactggggccgcaataccggcaccgac
ggatcgaccaaggtcgccaatctcgaccgcgtcgacaacacgctcaacccggcgatctgc
agcaacgcgccgggcgcggcgattccctgcggcgattacctcggttacggcgatatctcg
cagaaggtgctggactacatcctgttcaccacccgcgatcacggcggcaacgagcaaaag
agcttcaccgcgaacctgagcggtcagctgttcgaactgccggccggctgggtcgggttc
gcctcgggcatcgaagtgcgcaaggagcgcggctggcgcgatccggacccgctgaccgtg
ctcggcatcgccaacaccaaccaacaagatccgatcgccggcgaatatctggccaaggaa
gccttcgccgaattcgccgtgccgctgctgcagggccgcgcgctggccgaatcgctgacc
ttgaacctggccgtgcgctattcggactacgacctgttcggcgaggacatcaactacaag
gtcgggctggactggcaagtggtgccgtcgctgaagttgcgcgccaactacgcgaccgcg
ttccgcatccccaacatccccgagctgttcggcggcatcgccgaaggcaacctgaccacc
accgacccatgcagcggctgggccagccagccggccggctcgcaagtgcggcagaactgt
caggcctacggcgtgccggccggttacgtgcaaccgggcaacaccatcctgaccacgtcg
ggcggcaacaggaacctggaaccggaggacgcgcgctcgctgaccctcggcgcggtgtgg
acgccgggcttcgcgccgggcctgaccttgaccgcggactacttcaacatccgcatcgac
aacgccatccagcgcatcgacggatcgaccaagctggcgatctgctacaacacgcccggg
ctggcgcatccgttctgtggcaacgagaacttcacccgcaacccgatcaccggcgaggtc
gatttcctgtcctcgcagccggtcaacgccgccgacgaaagagtgtcgggcattgacctg
ggcggcctgtacgagttcgagatggccgggttcgattccagtttcagcctggacgtgtcg
tacctggacaagtacgacgtgcgcccgttccccggcgccgaggtcatccactacgcgggc
aagatcaccggcgggcgcggcagctacacccactggcgcgcgttcacttcgttgaccatg
agccgcgatgaatggtcgggcacctacagcctgcagtacatcggcaaggccgacgacatc
aacgccgcgcgcggcgatatcggcgatcactcgccgagcgtgagctatcacaacgtgcag
ctgaagtactcgccggtgaaatcgttcgacgtgtcgttcggcatcgacaacctgttcgac
aagaagccgcccttcatccagagctacaccgacgccaacaccgacaccatgacctacgat
ctgctgggtcggcgttggtatgcgcggttcggttaccgctggtag
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