Lysobacter capsici: LC55x_5637
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Entry
LC55x_5637 CDS
T04162
Name
(GenBank) ycaO-like family protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lcp03009
]
LC55x_5637
Ribosome biogenesis [BR:
lcp03009
]
Prokaryotic type
ribosomal protein modification factors
LC55x_5637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
Motif
Other DBs
NCBI-ProteinID:
ALN88883
LinkDB
All DBs
Position
complement(6284611..6285936)
Genome browser
AA seq
441 aa
AA seq
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MPSRCAQARPGTATRGKARSDAMIPLERERSLADADAVIRGYVRDQGWRMQIEVLGEGIA
STVCTLYDAAGVALSNGFGKGEAAASLTGAMYEAVEHYYTRKPPADEPIALVRSQQFAQD
PRYAALPFAAAFEANAQQQLACRTYRRLDEHGPGEDTVPVPLFMTYPAYLHNLVEGDDFD
YTSAIRFSSNSGVAIGASLEEAAVHAIGELVERDAWSLFLIAHYLGDPTRLGVIVDPQSL
PDEVARIHRAVCGQLDREVWLIDVTTDLQFPAFIATTADILADEETFPCGHGASLYAAHA
ATRALTELVQCIDIKSRTPKMREYSRLALDTLSDYRKLRDCAYFQVRADQLERVDWAHPA
RAAMAPKAMLGAMIAHLRRHGIGVYYAINQHAPGAFCIVSCVSFELERFFMVTSGIAMGP
GRRGMDLLEGRLRVPALVPSA
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
gtgccgtcgcgctgcgcgcaggcgcggccgggcacggcaacacgaggcaaggcaaggagc
gatgccatgattccactggaacgcgaacgatcgctggccgacgccgatgcggtgatccgc
ggctatgtgcgcgatcaaggctggcgcatgcagatcgaggtgctcggcgagggcatcgcc
tcgaccgtatgcaccttgtacgacgccgccggcgtcgcgctcagcaacggcttcggcaag
ggcgaggccgccgcctcgctgaccggcgcgatgtacgaagcggtcgagcactactacacg
cgcaagccgccggccgatgaacccatcgccctggtgcgttcgcagcaattcgcgcaggac
ccgcgttacgccgcgctgccgttcgcggccgcgttcgaggccaatgcgcagcaacagttg
gcctgccgcacctatcgccgtctcgacgagcacggtcctggcgaggacaccgtgccggtg
ccgttgttcatgacctatccggcgtatctgcacaatctggtcgaaggcgacgatttcgac
tacaccagcgcgatccgtttcagctccaacagcggcgtggcgatcggcgccagcctggag
gaagccgcggtccacgcgatcggcgaactggtcgagcgcgacgcctggtcgctgttcctg
atcgcgcattacctgggcgatccgacccgcctgggcgtgatcgtcgacccgcagtcgctg
cccgacgaggtcgcgcgcatccaccgcgcggtgtgcggacagctcgatcgcgaggtgtgg
ctgatcgatgtgaccaccgacctgcaattcccggccttcatcgccaccaccgccgacatc
ctcgccgacgaggaaacctttccctgcggccatggcgcatcgctgtacgccgcgcacgcc
gcgacccgcgcgctgaccgaactggtgcaatgcatcgacatcaagtcgcgcacgccgaag
atgcgcgagtacagccgtctggcgctggatacgctgagcgattaccgcaagctgcgcgat
tgcgcctatttccaggtccgcgccgaccaactcgaacgggtcgactgggcccatccggcg
cgcgcggcgatggcgcctaaggcgatgctcggcgcgatgatcgcgcacctgcgccgccac
ggcatcggcgtgtattacgcgatcaaccagcacgcgccgggcgcgttctgcatcgtcagc
tgcgtgtcgttcgagctcgaacgtttcttcatggtgacctcgggcatcgcgatgggcccg
ggccggcgcggcatggacctgctggaaggccgcctgcgggtgccggcgttggtgccctcg
gcttga
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