Lysobacter capsici: LC55x_5644
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Entry
LC55x_5644 CDS
T04162
Name
(GenBank) thermolysin metallopeptidase, catalytic domain protein
KO
K20273
zinc metalloprotease ZmpA
Organism
lcp
Lysobacter capsici
Pathway
lcp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LC55x_5644
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcp01002
]
LC55x_5644
Peptidases and inhibitors [BR:
lcp01002
]
Metallo peptidases
Family M4: thermolysin family
LC55x_5644
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M4_C
Peptidase_M4
FTP
PepSY
Motif
Other DBs
NCBI-ProteinID:
ALN88890
LinkDB
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Position
complement(6292194..6293837)
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AA seq
547 aa
AA seq
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MSLHSNLPKRAVLSFAVVAALAAPVVHAADSGKALAMNQARGLIANHLDALQGNSDDSFN
ARDAIVDRDGTEHVRFDRTFRGLRVIGGDVVVKSQRGQLRSALLTLRSKQRPSLTPRISK
DDAAVEAGARFGSRIEQVRGNEPVVYARGAKPVLAYEVTVQGEGNSRHSGLVTYYVDAAS
GKVLDVQDQIQTAAATGTGKSLYYGTMSISTDQKSATRFDLIDTTRGGGSVYDAKGAAVS
NLFDILSTTSNATLMTDTDNIWGNNTTSDRATVGVDIHYGVGVTWDYYKNVHGRAGLRGD
GVGIKSYAHTNFKTSSGTNSGANAAYVDLVKSMFYGDGDAARGIGPVVGIDVAGHEMTHG
VTAATSKLAYSGDSGGLNEAASDIIGTLVEFYANNASDPGDYRIGEKMRTDGKAFRDMYN
QASDGKSFNCYIAGGFDPALSDGAHNPHYTSGVGNLFFYFLAEGSVAPAGTGLNPAQMAC
NGDAGMTGIGRDKAGKIWYRALTAKFTSNTTYPQARAATLAAAGELYGNGSAEQNAVARA
WSAVKVN
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtcattgcattccaatctgcccaagcgcgccgtgctgagtttcgccgtggtcgccgcg
ctggcggcgcccgtcgttcacgccgccgacagcggcaaagccttggcgatgaaccaggcc
cgcggtctgattgcaaatcatctcgacgcgttgcaaggcaacagcgacgacagcttcaat
gcgcgcgacgccatcgtcgaccgcgacggcaccgagcatgtccgcttcgaccgcaccttc
cgcgggctgcgcgtgatcggcggcgacgtggtggtcaagtcgcagcgcggccagttgcgt
tcggccctgctgaccctgcgcagcaagcagcgtccgtcgctgaccccgcgcatcagcaag
gacgatgccgcggtcgaggccggcgcgcgcttcggcagccgcatcgagcaggtgcgcggc
aacgagccggtggtctacgcgcgcggcgccaagccggtgctggcctatgaggtgaccgtg
cagggcgagggcaacagccgccattcgggcctggtgacctattacgtcgacgcggccagc
ggcaaggtgctcgacgtgcaggaccagatccagaccgccgcggcgaccggcaccggcaag
tcgctgtactacggcaccatgagcatctccaccgatcagaagagcgcgaccaggttcgac
ctgatcgacaccacccgcggcggcggcagcgtctacgacgccaagggcgcggccgtctcc
aacctgttcgacatcctgtcgacgacgtccaacgccaccttgatgaccgacaccgacaac
atctggggcaacaacacgaccagcgatcgcgcgaccgtcggcgtggacatccattacggc
gtcggcgtgacctgggattactacaagaacgtgcatggccgcgccggcctgcgcggcgac
ggcgtcggcatcaagagctacgcccacaccaacttcaagacctccagcggcaccaacagc
ggcgccaacgcggcctacgtggatctggtcaagagcatgttctacggcgacggcgatgcc
gcgcgcggcatcggcccggtggtcggcatcgacgtggccggccacgagatgacccacggc
gtgaccgcggcgacctccaagctggcgtattccggcgattccggcggcctcaacgaagcc
gcgtccgacatcatcggcacgctggtcgagttctacgccaacaacgccagcgatccgggc
gactaccgcatcggcgagaagatgcgcaccgacggcaaggccttccgcgacatgtacaac
caggcctccgacggcaagtcgttcaactgctacatcgccggcggtttcgatcccgccctg
tccgacggcgcgcacaacccgcattacacctccggcgtgggcaacctgttcttctacttc
ctggccgaaggttcggtcgccccggccggcaccggtctgaacccggcgcagatggcctgc
aacggcgacgccggcatgaccgggatcggccgcgacaaggccggcaagatctggtatcgc
gcgctcaccgccaagttcacctccaacaccacctacccgcaggcgcgcgcggcgacgctg
gcggcggcgggcgagctgtacggcaacggttcggccgagcagaacgcggtggcgcgggcc
tggagcgcggtcaaggtcaactga
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