Lucilia cuprina (Australian sheep blowfly): 111675139
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Entry
111675139 CDS
T06013
Name
(RefSeq) LOW QUALITY PROTEIN: exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111675139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcq03019
]
111675139
Messenger RNA biogenesis [BR:
lcq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
111675139
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
111675139
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
111675139
NCBI-ProteinID:
XP_046801620
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All DBs
Position
3:65341318..65342200
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AA seq
212 aa
AA seq
DB search
MTANSSEKKVKHSNLICLPGQRLCLSDENTIAGQGTYERMGYIYATLAGTVDIREQNNXC
KFIEVQCAGSQTIVPVAGDVVTARVLQVNQRFAKCSILSIGEHVLEQNYRAMLRKEDVRS
TEKDRIEMYKSFRPGDIILAKVLPQTELSCYQLSTAENELGVVVAIASECGPQSAPMVPV
SWTEMQCPNTLVKEPRKVAKIVPASALKTEKS
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgactgctaatagttcggagaagaaagtaaagcattcaaatttaatatgtttaccgggg
caacgcctttgtttgtccgatgaaaacacaatagctggccagggtacatatgaacgcatg
gggtacatttatgctacacttgctggaacggttgatatacgggaacaaaataattagtgt
aaatttatagaggttcaatgtgctggaagtcaaacaatagtaccagttgctggagatgtt
gtaactgcacgtgttctgcaagtaaatcaacgatttgctaaatgttctatactgagtatc
ggtgaacatgtattggaacaaaactatcgcgctatgctacgtaaagaggatgtgcgatct
accgaaaaagatcgtatagaaatgtataaatcatttcgtcctggagatattatattggcc
aaagtattaccccaaaccgaattgtcttgttaccaattgagtacggcggaaaatgaattg
ggcgtagtggtagctatagccagtgaatgtggtccacaaagtgctcctatggtaccagta
agttggacagaaatgcagtgccctaataccttagttaaagaacctcgaaaagttgcaaaa
attgttccagctagtgctctgaaaactgaaaaatcatga
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