Lucilia cuprina (Australian sheep blowfly): 111675279
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Entry
111675279 CDS
T06013
Name
(RefSeq) protein SMG5
KO
K11125
protein SMG5
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111675279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcq03019
]
111675279
03032 DNA replication proteins [BR:
lcq03032
]
111675279
Messenger RNA biogenesis [BR:
lcq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
111675279
mRNA cycle factors
Common to processing body (P body) and stress granule
111675279
DNA replication proteins [BR:
lcq03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
111675279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
111675279
NCBI-ProteinID:
XP_023291785
LinkDB
All DBs
Position
2:complement(70490238..70497079)
Genome browser
AA seq
1225 aa
AA seq
DB search
MSVALKMDTVLSSGGSNASGDSIGGVSSSSNGGNGNSKSQRFGDSTHNNGVNAEVKKIYQ
QLYIVVKQLDDEKKQISGITQLFQNELEQKRAQLVQLCIQIIFKDFQSVGKKAREIMWRK
GYYEFIAYVKKNWAKELKDTAQQGAQENIQKLERFLCAGILNYKRIAAKMEEIYDLDLKY
LIDFTIINDGYLKEIKDKDRQGKGDTLDVDDINNYAVDKSLEAVSFALDTIHSSLLSLGD
LHRYFLDFRIDTKLKINKQLAAKYYFEAFKLNPAIGMAQNQLGTLYYGQNYDLDSIYHYL
YSLVSLIPFELSENNVCKLFASHADYLTKLDPEKIEFSLQDFYARFYLIVDIFFFDKEVP
DFNSLCHCVLVDLRKILCSKTFKINDSSIFKIVSILFFCLSKLKMINSQKVYSLNAFLVA
VCSDLMDACIVNLEQTILAKSTENEEFHTMYAKKFEEFDMVVRKSRNEYKNWLASIGEAE
RKEKKLTQLSQKDFSSDSRESQRSNEDYICKTQDSNKASKDDNKNDGEPISTRSSDEAKE
SDLKTPLSCKSKKKGMKLRRRRRKIAQSDDSSCYDTESDMDTDFSTDDEDYTDLSSNFDT
DFSDVEAADPGEQDQERECELQVENKHKHNNLRNSSRHGSKESVDSIAGSVGPNFSDNED
IVIEEENIIYPEDQEKQQVPRCNSQENDTEELLKSFEILQLHTNNSVLNFTNCDKEVSQK
TQQSNILKTNEDSKAALEEPPKKMVYRNKYTKINPNIIVDFAQNEPTIRALKILFDWLRI
NHEILFGCYHSNPEFIHKIMKLLNYCNIDIFTRKVYFEREFLVTPNVRQTLGDLFDVRVN
VPLSEDFVFKSFDIFQSTQITLDWETTIREKVTSQEECILRIFKMVDFGFFICKQKKFNY
RFCVKARRFTENTKKKREEKKSSSRRRERRTAKNAARKRAEGRTRRYSDRKNGIVRKSYT
SNEEKDTVEECKRMPRKGYLRNRNTEKFNTNGAAGGGTSASTTTNSAICEKMQSSSGADE
ERSEAMSKKCEIMGKLWLKNEVETLEEELRKNPLNMIMTPFVVVDAKALTEYNGIVKNLV
KSKKFIVLIPNAVFNELDDLKKRSENARNVIRWLEQEFKHGNRHMRAQRDNENLALSLIK
IPRKLDRDASVFLQIAQFCNHLVANHSDPNATEFQSNVVTYLSGDYLHEKQRNQNNFSFT
GILDSIPVRHDQIANFYAKFKANKK
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcgcgttaaaaatggacacagttttgagttccggaggctcgaatgcctctggt
gatagtattggaggtgtaagtagcagcagtaatggtggaaacggtaacagcaaatctcaa
cgttttggagattctacacataacaatggcgttaatgcagaagtcaaaaaaatttatcaa
caactatatattgtggtcaagcaactggatgatgagaaaaaacaaatatctggtataact
caattatttcaaaatgaattggaacaaaagcgtgctcaactcgtgcaattgtgtatacaa
ataatcttcaaagattttcagtcggttggcaaaaaggctcgagagattatgtggcgcaaa
ggttattatgaatttattgcatatgtaaagaaaaattgggcaaaagaactaaaggataca
gcccaacaaggcgctcaagagaatatccaaaaactggagagattcttatgtgctggtata
ttaaactataagaggatagcagcaaaaatggaagagatttacgatttagacctaaaatat
ttaattgattttaccatcataaacgatggctatttaaaggagatcaaagataaagatcgc
caaggcaagggtgacactttggacgtagatgatataaacaattatgcggtagataaaagt
ttggaagctgtatcgtttgctttggataccatacattcgtctcttttgagtttgggtgat
ttgcatcgttacttcctggactttcgtatagatacaaaactaaaaataaacaagcagttg
gctgctaaatattacttcgaagcgtttaagcttaatcctgcaataggcatggctcagaat
caattgggcaccttgtactatggccaaaattatgacctggactccatatatcattatctt
tactcgctcgtaagcctaataccctttgaattgagcgaaaacaatgtttgtaagctgttc
gcttcgcatgctgattacttgacaaaattagatcccgaaaaaattgaatttagcctgcag
gatttttatgctcgcttttatttaatcgttgatatatttttctttgacaaggaggtgcca
gattttaactccttgtgtcactgtgtcttggttgatttgcgcaaaatactctgctccaaa
acatttaaaataaacgattcatctatattcaaaattgtttcgattctatttttctgtcta
tcaaaactgaaaatgattaactctcagaaagtgtactctttaaatgcttttctggtagct
gtatgttcagatttaatggatgcttgtatcgttaatctcgaacagaccattctagccaaa
tcaacagaaaatgaagagtttcataccatgtacgccaagaaattcgaagagtttgacatg
gtagttaggaaatcacgcaatgaatacaagaattggttggcatcaatcggcgaagctgaa
agaaaggaaaagaaactgacacagttatcacaaaaagatttctcttcagattctcgcgag
tcgcaaaggtcaaatgaggattatatttgtaagacacaagatagtaacaaggccagtaaa
gatgataacaaaaatgatggtgaacctatttctacaagatcatcggacgaggcaaaggaa
agtgatttaaaaactccactctcttgtaagagtaagaagaagggaatgaaactacgtcga
cgtcgccgtaaaattgctcagtcagatgacagctcttgttatgacaccgaatcagatatg
gatacggacttttcaaccgatgatgaagactacacagatttaagttcgaatttcgatacg
gattttagtgatgttgaagcggccgaccccggggaacaagatcaagaacgcgaatgtgaa
cttcaagttgaaaacaaacacaaacataataatttgcgcaactcttctcgtcacggctcc
aaggaaagtgttgactctattgccggcagtgttggaccaaacttctcggataacgaagat
atcgtaatagaagaagaaaacattatctatccagaagatcaagagaaacaacaggtccca
cgttgtaattcgcaagaaaatgatactgaagagctcctaaaaagtttcgaaattttacaa
ttacacactaataattcggtattaaattttaccaattgcgataaagaagtatcacagaag
acccagcaatccaacattttaaagacaaatgaggacagcaaagctgcacttgaggaacca
cccaagaaaatggtttatcgcaacaaatacaccaagataaatcccaatatcattgtagac
tttgcccaaaacgaacctaccataagagctttgaaaattctgttcgattggttgcgtatt
aatcatgaaatactctttggttgctaccactccaatccagaattcattcacaaaattatg
aaattattgaattattgcaatattgatatatttacacgtaaggtttattttgagcgtgaa
tttcttgttacacccaatgttcgtcaaaccctaggcgatctctttgacgttcgtgtcaat
gtaccactttctgaagactttgtattcaaaagctttgatatatttcaaagcactcaaatt
actctagactgggaaacaacaatacgcgaaaaagttacctcgcaggaagagtgcattctg
cgtatattcaagatggtcgatttcggtttctttatatgcaaacaaaaaaagtttaattat
cgcttctgcgtcaaggccagacgtttcactgaaaatactaaaaagaaacgcgaagaaaag
aagtcatcttctagaagacgtgaaagacgtaccgctaaaaatgctgctcgtaagcgtgca
gaaggtagaactcgtcgttattccgaccgtaaaaatggtattgtacgcaaaagttatacc
agcaacgaggagaaagatactgttgaagaatgtaaacgtatgcctcgcaaaggctacctc
cgcaatcgcaacaccgaaaaatttaataccaatggtgctgccggtggtggtacttctgca
tccactactacaaatagcgctatttgcgaaaagatgcaatcaagcagtggtgctgatgaa
gaacgctccgaggcaatgtctaaaaaatgtgaaattatgggcaagttgtggttgaaaaat
gaagtggagaccctggaagaagagttgcgtaaaaatcctttgaacatgattatgactcct
tttgttgtcgtggatgctaaagcactaacagaatataatggtattgttaagaacttggta
aaaagcaaaaaattcatcgtactcatacccaatgctgtttttaatgaattggatgactta
aagaaacgtagtgaaaatgcccgtaatgttatacgttggttggagcaagaatttaaacat
ggcaaccgtcatatgcgtgcacagagagataatgaaaatttagccttgtctctaataaaa
attccaagaaaattagatcgtgatgcttctgttttcttacaaattgcacaattttgcaat
cacttggtagccaatcattctgatccaaatgctactgaatttcaatcaaatgtggttact
tatttgtctggcgattatttgcatgagaaacaacgtaatcagaacaacttcagctttact
ggtattttagattctataccagtaagacatgatcaaattgcaaatttctatgcgaaattt
aaggccaataaaaaatga
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integrated database retrieval system
